RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 CRYMQ14894 314 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 MFSD14BQ5SR56 506 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 MIS18BP1Q6P0N0 1132 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 FGAP02671 866 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 NAALADL2Q58DX5 795 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 TJAP1Q5JTD0 557 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 METTL23Q86XA0 190 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 TAP1Q03518 808 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 FAM193BQ96PV7 902 aaPredicted RBP20.62■□□□□ 0.89
HDAC4-201ENST00000345617 ARHGEF5Q12774 1597 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 KCNA3P22001 575 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 CDC27P30260 824 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 APOA5Q6Q788 366 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 LUZP2Q86TE4 346 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 TRIM69Q86WT6 500 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 ANKRD13CQ8N6S4 541 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 CCDC90BQ9GZT6 254 aa20.62■□□□□ 0.89
HDAC4-201ENST00000345617 FAF2Q96CS3 445 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 TRIM62Q9BVG3 475 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 HOXC9P31274 260 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 NCAPG2Q86XI2 1143 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 PLA2G4DQ86XP0 818 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 CPXCR1Q8N123 301 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 GNPATO15228 680 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 DDX56Q9NY93 547 aaKnown RBP20.61■□□□□ 0.89
HDAC4-201ENST00000345617 LGALS16A8MUM7 142 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 ZNF263O14978 683 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 DNAJC6O75061 913 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 ADCY1Q08828 1119 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 ALKBH5Q6P6C2 394 aaKnown RBP20.61■□□□□ 0.89
HDAC4-201ENST00000345617 KSR1Q8IVT5 923 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 PALMO75781 387 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 ANO3Q9BYT9 981 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 ZBTB41Q5SVQ8 909 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 LZTS3O60299 673 aaPredicted RBP20.61■□□□□ 0.89
HDAC4-201ENST00000345617 FOXP3Q9BZS1 431 aa20.61■□□□□ 0.89
HDAC4-201ENST00000345617 STRNO43815 780 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 NR5A1Q13285 461 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 TRIM72Q6ZMU5 477 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 CEP95Q96GE4 821 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 ELF1P32519 619 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 BBS9Q3SYG4 887 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 LRIG3Q6UXM1 1119 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 MRPL1Q9BYD6 325 aaKnown RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 SLC4A7Q9Y6M7 1214 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 MYO1DO94832 1006 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 BYSLQ13895 437 aaKnown RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 CLIC6Q96NY7 704 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 AP1M1Q9BXS5 423 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 PSD3Q9NYI0 1048 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 DYNLT1P63172 113 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 OCM2P0CE71 109 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 OCMP0CE72 109 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 SOX5P35711 763 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 ZAP70P43403 619 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 DPP8Q6V1X1 898 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 KMT5AQ9NQR1 393 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 OLFML3Q9NRN5 406 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 RSPH1Q8WYR4 309 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 ASCC2Q9H1I8 757 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 TMEM245Q9H330 911 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 GEMIN8Q9NWZ8 242 aaKnown RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 EIF3HO15372 352 aaKnown RBP eCLIP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 TBXAS1P24557 533 aaPredicted RBP20.6■□□□□ 0.89
HDAC4-201ENST00000345617 HIPK4Q8NE63 616 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 FIS1Q9Y3D6 152 aa20.6■□□□□ 0.89
HDAC4-201ENST00000345617 ZRANB2O95218 330 aaKnown RBP eCLIP20.59■□□□□ 0.89
HDAC4-201ENST00000345617 MECOMQ03112 1051 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 ANGPT2O15123 496 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 PGM1P36871 562 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 IMPG1Q17R60 797 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 GPIHBP1Q8IV16 184 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 KIAA1586Q9HCI6 787 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 ACADSP16219 412 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 ITPRIPL1Q6GPH6 555 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 GAS2L3Q86XJ1 694 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 JAG2Q9Y219 1238 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 EYA1Q99502 592 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 AGTP01019 485 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 MAPKAPK5Q8IW41 473 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 SMCR8Q8TEV9 937 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-201ENST00000345617 PARD3BQ8TEW8 1205 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 ADD3Q9UEY8 706 aaKnown RBP20.59■□□□□ 0.89
HDAC4-201ENST00000345617 SEPT9Q9UHD8 586 aaPredicted RBP20.59■□□□□ 0.89
HDAC4-201ENST00000345617 IQCA1LA6NCM1 817 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 ZNF839A8K0R7 811 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 APOA4P06727 396 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 PKP1Q13835 747 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 GINM1Q9NU53 330 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 SPOUT1Q5T280 376 aaKnown RBP20.59■□□□□ 0.89
HDAC4-201ENST00000345617 SUCLG2Q96I99 432 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 GPR108Q9NPR9 543 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 ADGRL2O95490 1459 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 WDR19Q8NEZ3 1342 aa20.59■□□□□ 0.89
HDAC4-201ENST00000345617 hCG_1642624A0A1W2PR95 340 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 ZNF577Q9BSK1 485 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 ITSN1Q15811 1721 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 RIMBP2O15034 1052 aa20.58■□□□□ 0.89
HDAC4-201ENST00000345617 GPKOWQ92917 476 aaPredicted RBP eCLIP20.58■□□□□ 0.89
HDAC4-201ENST00000345617 RMDN1Q96DB5 314 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms