RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 DNAL1Q4LDG9 190 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 MTBPQ96DY7 904 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 THRAP3Q9Y2W1 955 aaKnown RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 TARSP26639 723 aaKnown RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 MAP4P27816 1152 aaKnown RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 ENAHQ8N8S7 591 aaPredicted RBP12.92□□□□□ -0.34
COL12A1-202ENST00000345356 THTPAQ9BU02 230 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 CFAP74Q9C0B2 1584 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 CLASP1Q7Z460 1538 aa12.92□□□□□ -0.34
COL12A1-202ENST00000345356 ZRANB2O95218 330 aaKnown RBP eCLIP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 CDC27P30260 824 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 MCF2L2Q86YR7 1114 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 C1orf54Q8WWF1 131 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 CSRNP1Q96S65 589 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 SEC24DO94855 1032 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 ESRRBO95718 433 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 PDIA2Q13087 525 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 PDZD4Q76G19 769 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 ZNF513Q8N8E2 541 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 CNOT8Q9UFF9 292 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 FBXO2Q9UK22 296 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 UBN2Q6ZU65 1347 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 CPSF1Q10570 1443 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 UFL1O94874 794 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 KRT17Q04695 432 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 DMP1Q13316 513 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 ACAD11Q709F0 780 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 CYB5R4Q7L1T6 521 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 RSPH3Q86UC2 560 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 LCORLQ8N3X6 602 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 PIGOQ8TEQ8 1089 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 SENP1Q9P0U3 644 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 MAGED2Q9UNF1 606 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 SMG5Q9UPR3 1016 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 WDR64B1ANS9 1081 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 PDE8BO95263 885 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 KRT8P05787 483 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 IZUMO3Q5VZ72 239 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 MRPL40Q9NQ50 206 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 KCNG1Q9UIX4 513 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 TRIM33Q9UPN9 1127 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 C15orf41Q9Y2V0 281 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 FAM47DPA6NHR8 397 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 SRGNP10124 158 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 ATP6V1B1P15313 513 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 THOC5Q13769 683 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
COL12A1-202ENST00000345356 MB21D2Q8IYB1 491 aaPredicted RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 RANBP17Q9H2T7 1088 aaKnown RBP12.91□□□□□ -0.34
COL12A1-202ENST00000345356 CDH16O75309 829 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 DAB2P98082 770 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 RAB44Q7Z6P3 723 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 DNAAF3Q8N9W5 541 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 FAF2Q96CS3 445 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 YARSP54577 528 aaKnown RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 DSG1Q02413 1049 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 KCNB1Q14721 858 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TSGA10IPQ3SY00 556 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TBC1D10BQ4KMP7 808 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 RBM26Q5T8P6 1007 aaKnown RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 PPM1NQ8N819 430 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 MARCH10Q8NA82 808 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 ENGASEQ8NFI3 743 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TEKT3Q9BXF9 490 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TNRQ92752 1358 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 DEAF1O75398 565 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TMCC1O94876 653 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 GGPS1O95749 300 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TPP2P29144 1249 aaPredicted RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 CASKIN2Q8WXE0 1202 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 ACCSQ96QU6 501 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 SIKE1Q9BRV8 207 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 TSSK1BQ9BXA7 367 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 SLC13A1Q9BZW2 595 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 B2RBV5 119 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 ADAM33Q9BZ11 813 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 OLFML3Q9NRN5 406 aa12.9□□□□□ -0.34
COL12A1-202ENST00000345356 DDX20Q9UHI6 824 aaKnown RBP12.9□□□□□ -0.34
COL12A1-202ENST00000345356 CAPN9O14815 690 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 GFAPP14136 432 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 GPS1Q13098 491 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 ANKRD40Q6AI12 368 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 MFN1Q8IWA4 741 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 CPXCR1Q8N123 301 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.35
COL12A1-202ENST00000345356 TBC1D22AQ8WUA7 517 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 TMBIM4Q9HC24 238 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 PCDHA1Q9Y5I3 950 aa12.9□□□□□ -0.35
COL12A1-202ENST00000345356 MROH7-TTC4A0A0A0MT08 1334 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 PI4K2BG5E9Z4 385 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 GOLGA8RI6L899 631 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 HNRNPDLO14979 420 aaKnown RBP12.89□□□□□ -0.35
COL12A1-202ENST00000345356 FSBPO95073 299 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 TNNC2P02585 160 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 APOA1P02647 267 aa12.89□□□□□ -0.35
COL12A1-202ENST00000345356 PREPLQ4J6C6 727 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms