RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 COL6A3P12111 3177 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 TTC3P53804 2025 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 KIAA1671Q9BY89 1806 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 POTEMA6NI47 508 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 LAD1O00515 517 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 MAGEB2O15479 319 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 DKC1O60832 514 aaKnown RBP eCLIP15.39■□□□□ 0.05
TPM4-202ENST00000344824 P4HBP07237 508 aaKnown RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 PTMSP20962 102 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 QARSP47897 775 aaKnown RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 NFX1Q12986 1120 aaKnown RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 EPHA7Q15375 998 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 IL17AQ16552 155 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 AXDND1Q5T1B0 1012 aaPredicted RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 DTHD1Q6ZMT9 781 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 KIAA0319LQ8IZA0 1049 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 NME8Q8N427 588 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 FSIP1Q8NA03 581 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 CCDC43Q96MW1 224 aaKnown RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 CSRNP2Q9H175 543 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 TTC12Q9H892 705 aaPredicted RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 AGO3Q9H9G7 860 aaKnown RBP15.39■□□□□ 0.05
TPM4-202ENST00000344824 RGL1Q9NZL6 768 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 MTUS1Q9ULD2 1270 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 PCDHA12Q9UN75 941 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 CHD7Q9P2D1 2997 aa15.39■□□□□ 0.05
TPM4-202ENST00000344824 RALGAPA2Q2PPJ7 1873 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 LCHNA4D1U4 455 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 RPS6KA5O75582 802 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 GJB5O95377 273 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 TECP42680 631 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 ARL6IP4Q66PJ3 421 aaKnown RBP15.38■□□□□ 0.05
TPM4-202ENST00000344824 ADALQ6DHV7 355 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 MTMR9Q96QG7 549 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 STXBP5LQ9Y2K9 1186 aa15.38■□□□□ 0.05
TPM4-202ENST00000344824 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.37■□□□□ 0.05
TPM4-202ENST00000344824 ARHGEF15O94989 841 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 IGFBP4P22692 258 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 PRPHP41219 470 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 NPEPPSP55786 919 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 SPIRE1Q08AE8 756 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 SHC4Q6S5L8 630 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 ANO5Q75V66 913 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 TPH2Q8IWU9 490 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 MICALL1Q8N3F8 863 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 GPT2Q8TD30 523 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 NLRP7Q8WX94 980 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 ARNTL2Q8WYA1 636 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
TPM4-202ENST00000344824 CEP170P1Q96L14 293 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 YME1L1Q96TA2 773 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 EIF2AK1Q9BQI3 630 aaKnown RBP15.37■□□□□ 0.05
TPM4-202ENST00000344824 GOLPH3LQ9H4A5 285 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 CDHR5Q9HBB8 845 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 WRAP73Q9P2S5 460 aaPredicted RBP15.37■□□□□ 0.05
TPM4-202ENST00000344824 PADI3Q9ULW8 664 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 NOC2LQ9Y3T9 749 aaKnown RBP15.37■□□□□ 0.05
TPM4-202ENST00000344824 KDM3AQ9Y4C1 1321 aa15.37■□□□□ 0.05
TPM4-202ENST00000344824 A0A1B0GVL5 298 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 PP2D1A8MPX8 630 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 LIG1P18858 919 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 POLGP54098 1239 aaPredicted RBP15.36■□□□□ 0.05
TPM4-202ENST00000344824 NLRP11P59045 1033 aaKnown RBP15.36■□□□□ 0.05
TPM4-202ENST00000344824 SPRED2Q7Z698 418 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 TMEM40Q8WWA1 233 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 RAD9AQ99638 391 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 CYP26B1Q9NR63 512 aa15.36■□□□□ 0.05
TPM4-202ENST00000344824 MORC2Q9Y6X9 1032 aaPredicted RBP15.36■□□□□ 0.05
TPM4-202ENST00000344824 A0A1W2PQ27 194 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 A0A1W2PQ64 194 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 A0A1W2PQD8 194 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 TRAK2O60296 914 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 CDC25AP30304 524 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 YWHABP31946 246 aaKnown RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 DNM2P50570 870 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 TAP1Q03518 808 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 DRP2Q13474 957 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 TARBP2Q15633 366 aaKnown RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 XKR9Q5GH70 373 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 CCDC73Q6ZRK6 1079 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 USP49Q70CQ1 688 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 USP38Q8NB14 1042 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 MAFAQ8NHW3 353 aaPredicted RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 LINC01599Q8WXQ3 324 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 SLC7A3Q8WY07 619 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 PPM1EQ8WY54 764 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 SYMPKQ92797 1274 aaKnown RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 EPSTI1Q96J88 318 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 NIFKQ9BYG3 293 aaKnown RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 ZSWIM4Q9H7M6 989 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 FAM13BQ9NYF5 915 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 FNDC1Q4ZHG4 1894 aaPredicted RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 EYSQ5T1H1 3165 aa15.35■□□□□ 0.05
TPM4-202ENST00000344824 PRRC2BQ5JSZ5 2229 aaKnown RBP15.35■□□□□ 0.05
TPM4-202ENST00000344824 DENND3A2RUS2 1198 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 RFXAPO00287 272 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 STBD1O95210 358 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 MBD3O95983 291 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 PFKFB1P16118 471 aa15.34■□□□□ 0.05
TPM4-202ENST00000344824 CMA1P23946 247 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms