RNA–Protein interactions for RNA: ENST00000343805.10

SP140-201, Transcript of SP140 nuclear body protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SP140, Length 2,910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-201ENST00000343805 SRGAP2O75044 1071 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CLCN2P51788 898 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 ARPC4P59998 168 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CTAG1AP78358 180 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 POU5F1Q01860 360 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 PPP2R5BQ15173 497 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 PFKFB3Q16875 520 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 ODR4Q5SWX8 454 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 DTHD1Q6ZMT9 781 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CNGA4Q8IV77 575 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 ZNF444Q8N0Y2 327 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 ZDHHC16Q969W1 377 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CLIP3Q96DZ5 547 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CFHR5Q9BXR6 569 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 ZNF408Q9H9D4 720 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 ACTR5Q9H9F9 607 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 CTAGE9A4FU28 777 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 N4BP1O75113 896 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 ZPR1O75312 459 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 DDAH1O94760 285 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 TMCC1O94876 653 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 LUC7L3O95232 432 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 TUBBP07437 444 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 KLK7P49862 253 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 IRAK1P51617 712 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 EIF6P56537 245 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 GTF2IP78347 998 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 TCP11X2Q5H9J9 407 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 PDXDC2PQ6P474 469 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 CYB5D1Q6P9G0 228 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 PANX2Q96RD6 677 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 GMLQ99445 158 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 SRA1Q9HD15 236 aaKnown RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 ABHD10Q9NUJ1 306 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 PCMTD2Q9NV79 361 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 ZFATQ9P243 1243 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 SEPT9Q9UHD8 586 aaPredicted RBP9.49□□□□□ -0.89
SP140-201ENST00000343805 C15orf41Q9Y2V0 281 aa9.49□□□□□ -0.89
SP140-201ENST00000343805 UTRNP46939 3433 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 TTC26A0AVF1 554 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 TARSL2A2RTX5 802 aaKnown RBP9.48□□□□□ -0.89
SP140-201ENST00000343805 NKRFO15226 690 aaKnown RBP eCLIP9.48□□□□□ -0.89
SP140-201ENST00000343805 SMIM24O75264 130 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 PDHBP11177 359 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 KIF5BP33176 963 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 HSPA1LP34931 641 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 HOXD12P35452 270 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 ARHGEF6Q15052 776 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 TKFCQ3LXA3 575 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 TMC4Q7Z404 712 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 FUKQ8N0W3 1084 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 TEX9Q8N6V9 391 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.48□□□□□ -0.89
SP140-201ENST00000343805 GABPB2Q8TAK5 448 aaPredicted RBP9.48□□□□□ -0.89
SP140-201ENST00000343805 CNKSR1Q969H4 720 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 PNKPQ96T60 521 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 MRPL46Q9H2W6 279 aaKnown RBP9.48□□□□□ -0.89
SP140-201ENST00000343805 TBKBP1A7MCY6 615 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 P4HA2O15460 535 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 CCNT1O60563 726 aaKnown RBP9.48□□□□□ -0.89
SP140-201ENST00000343805 BMP15O95972 392 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 NFIXQ14938 502 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.48□□□□□ -0.89
SP140-201ENST00000343805 MAATS1Q7Z4T9 603 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 NANOGNBQ7Z5D8 188 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 AMIGO3Q86WK7 504 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 NSMCE1Q8WV22 266 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 CTNNBL1Q8WYA6 563 aaPredicted RBP9.48□□□□□ -0.89
SP140-201ENST00000343805 OPTNQ96CV9 577 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 HVCN1Q96D96 273 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 ANKRD27Q96NW4 1050 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 CCDC68Q9H2F9 335 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.48□□□□□ -0.89
SP140-201ENST00000343805 SPATA31A1Q5TZJ5 1347 aa9.48□□□□□ -0.89
SP140-201ENST00000343805 RASSF10A6NK89 507 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 CYTH3O43739 400 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 GFPT2O94808 682 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 TROVE2P10155 538 aaKnown RBP eCLIP9.47□□□□□ -0.89
SP140-201ENST00000343805 ALDH3A1P30838 453 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 TECP42680 631 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 MRPS25P82663 173 aaKnown RBP9.47□□□□□ -0.89
SP140-201ENST00000343805 DAB2P98082 770 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 CYP27A1Q02318 531 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 ORC1Q13415 861 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 SF3B3Q15393 1217 aaKnown RBP9.47□□□□□ -0.89
SP140-201ENST00000343805 ZNF658Q5TYW1 1059 aaPredicted RBP9.47□□□□□ -0.89
SP140-201ENST00000343805 SRGAP1Q7Z6B7 1085 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 NOA1Q8NC60 698 aaKnown RBP9.47□□□□□ -0.89
SP140-201ENST00000343805 CCHCR1Q8TD31 782 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 FKBPLQ9UIM3 349 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 CDC23Q9UJX2 597 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 DISP2A7MBM2 1401 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 GOLGA6L7A0A1B0GV03 622 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.47□□□□□ -0.89
SP140-201ENST00000343805 ZBED4O75132 1171 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 VIMP08670 466 aaKnown RBP9.47□□□□□ -0.89
SP140-201ENST00000343805 PDGFRBP09619 1106 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 FCER1AP12319 257 aa9.47□□□□□ -0.89
SP140-201ENST00000343805 IBSPP21815 317 aaPredicted RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms