RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 FAM237AA0A1B0GTK4 181 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 SGK1O00141 431 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 SLC37A4O43826 429 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 ADCY2Q08462 1091 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 KRT81Q14533 505 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 NUGGCQ68CJ6 796 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 EEPD1Q7L9B9 569 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 LDHDQ86WU2 507 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 C11orf70Q9BRQ4 267 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 RAVER2Q9HCJ3 691 aaKnown RBP7.74□□□□□ -1.17
VCAN-202ENST00000342785 DMGDHQ9UI17 866 aaKnown RBP7.74□□□□□ -1.17
VCAN-202ENST00000342785 ABCB11O95342 1321 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 DENND3A2RUS2 1198 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 PSAPP07602 524 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 CARSP49589 748 aaKnown RBP7.74□□□□□ -1.17
VCAN-202ENST00000342785 IGBP1P78318 339 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 KRT76Q01546 638 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 E2F5Q15329 346 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 FAM160B1Q5W0V3 765 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 CENPPQ6IPU0 288 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 TTC16Q8NEE8 873 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 MICAL1Q8TDZ2 1067 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 RNPC3Q96LT9 517 aaKnown RBP7.74□□□□□ -1.17
VCAN-202ENST00000342785 RILPQ96NA2 401 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 SLC4A9Q96Q91 983 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 MIS12Q9H081 205 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 NBPF3Q9H094 633 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 EHD2Q9NZN4 543 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.74□□□□□ -1.17
VCAN-202ENST00000342785 PPP1R37O75864 691 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 RPA1P27694 616 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 SLC8A1P32418 973 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 DYNLT1P63172 113 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 FIGNQ5HY92 759 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 KRT39Q6A163 491 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 ELAC2Q9BQ52 826 aaKnown RBP7.74□□□□□ -1.17
VCAN-202ENST00000342785 GOLPH3Q9H4A6 298 aa7.74□□□□□ -1.17
VCAN-202ENST00000342785 BAZ2BQ9UIF8 2168 aaKnown RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 A0A087X0T9 212 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 MMEP08473 750 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 FAM228BP0C875 321 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 CA4P22748 312 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 JAK3P52333 1124 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 TBX2Q13207 712 aaPredicted RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 TMED2Q15363 201 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 CIAPIN1Q6FI81 312 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 HHIPL2Q6UWX4 724 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 RPUSD2Q8IZ73 545 aaKnown RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 MMGT1Q8N4V1 131 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 CAPN6Q9Y6Q1 641 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 CNTNAP4Q9C0A0 1308 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 EXOC1LA0A1B0GW35 172 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 GUCY1A3Q02108 690 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 KCTD2Q14681 263 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 SNCBQ16143 134 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 BBS9Q3SYG4 887 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 CCDC38Q502W7 563 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 SDCCAG8Q86SQ7 713 aaPredicted RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 SAAL1Q96ER3 474 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 HERC5Q9UII4 1024 aaKnown RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 HPCAL4Q9UM19 191 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 MAD1L1Q9Y6D9 718 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 OSTNP61366 133 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 ZNF394Q53GI3 561 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 TBC1D31Q96DN5 1066 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 CALN1Q9BXU9 219 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 PITPNM2Q9BZ72 1349 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 WTIPA6NIX2 430 aaPredicted RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 CHRNA3P32297 505 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 SPP2Q13103 211 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 PPP1R2P3Q6NXS1 205 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 MIS18BP1Q6P0N0 1132 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 TRAPPC11Q7Z392 1133 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 ATP2A3Q93084 1043 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 MSTO1Q9BUK6 570 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 ACTR5Q9H9F9 607 aaPredicted RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 GMNCA6NCL1 334 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 LRRC10BA6NIK2 292 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 KRT14P02533 472 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 NAB2Q15742 525 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 FAM133BQ5BKY9 247 aaKnown RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 RSRC2Q7L4I2 434 aaKnown RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 THNSL1Q8IYQ7 743 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 ZNF564Q8TBZ8 553 aaPredicted RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 GJD4Q96KN9 370 aaPredicted RBP7.73□□□□□ -1.17
VCAN-202ENST00000342785 CFAP57Q96MR6 1250 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 FAM213AQ9BRX8 229 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 PRR12Q9ULL5 1215 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 AFF2P51816 1311 aa7.73□□□□□ -1.17
VCAN-202ENST00000342785 EVI5O60447 810 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 TFRCP02786 760 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 CYP11B2P19099 503 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 PMS1P54277 932 aaKnown RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 WDR93Q6P2C0 686 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 ZBTB33Q86T24 672 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 RTKN2Q8IZC4 609 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.72□□□□□ -1.17
VCAN-202ENST00000342785 JPH2Q9BR39 696 aaPredicted RBP7.72□□□□□ -1.17
VCAN-202ENST00000342785 RNF146Q9NTX7 359 aa7.72□□□□□ -1.17
VCAN-202ENST00000342785 DCAF8L1A6NGE4 600 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms