RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 DDAH1O94760 285 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 POLGP54098 1239 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-201ENST00000342245 YARSP54577 528 aaKnown RBP19.98■□□□□ 0.79
SMPD1-201ENST00000342245 DEUP1Q05D60 604 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 KIAA1755Q5JYT7 1200 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 PPFIBP2Q8ND30 876 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 SERPINB12Q96P63 405 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 HAPLN3Q96S86 360 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 PACSIN1Q9BY11 444 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 PREBQ9HCU5 417 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 RIC8AQ9NPQ8 531 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 TCP11L1Q9NUJ3 509 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 INTUQ9ULD6 942 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 SMIM23A6NLE4 172 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 GSG1L2A8MUP6 293 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 ATP9AO75110 1047 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 ATP6V1G1O75348 118 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 SERPINB4P48594 390 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 RASIP1Q5U651 963 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 TMTC3Q6ZXV5 915 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 UCMAQ8WVF2 138 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 RAPGEF4Q8WZA2 1011 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 FAM163AQ96GL9 167 aaPredicted RBP19.98■□□□□ 0.79
SMPD1-201ENST00000342245 CENPKQ9BS16 269 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 TRIM51Q9BSJ1 452 aa19.98■□□□□ 0.79
SMPD1-201ENST00000342245 IQCGQ9H095 443 aaKnown RBP19.98■□□□□ 0.79
SMPD1-201ENST00000342245 TMEM120BA0PK00 339 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 SMAPO00193 183 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 MAPK13O15264 365 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 NOL4O94818 638 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 TMCC1O94876 653 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 MBD4O95243 580 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 FCER1AP12319 257 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 SCG2P13521 617 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 ECHDC2Q86YB7 292 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 KIAA0895Q8NCT3 520 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 HES6Q96HZ4 224 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 PPP1R12CQ9BZL4 782 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 TAOK3Q9H2K8 898 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 NUP188Q5SRE5 1749 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 TRPM3Q9HCF6 1732 aaPredicted RBP19.97■□□□□ 0.79
SMPD1-201ENST00000342245 PVALEFA0A1B0GWK0 134 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 RARGP13631 454 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 POLR2FP61218 127 aaKnown RBP19.97■□□□□ 0.79
SMPD1-201ENST00000342245 ARHGEF18Q6ZSZ5 1173 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 RPTORQ8N122 1335 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 OLFM3Q96PB7 478 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 TGS1Q96RS0 853 aaKnown RBP19.97■□□□□ 0.79
SMPD1-201ENST00000342245 SLX1AQ9BQ83 275 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 TRIM31Q9BZY9 425 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 CARD9Q9H257 536 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 TLE6Q9H808 572 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 USH1CQ9Y6N9 552 aa19.97■□□□□ 0.79
SMPD1-201ENST00000342245 PODXLO00592 558 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 GM2AP17900 193 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 RASA1P20936 1047 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 PLTPP55058 493 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 LSAMPQ13449 338 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 RAPGEF1Q13905 1077 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 CABP7Q86V35 215 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 PROCA1Q8NCQ7 364 aaPredicted RBP19.96■□□□□ 0.79
SMPD1-201ENST00000342245 EPS8L3Q8TE67 593 aaKnown RBP19.96■□□□□ 0.79
SMPD1-201ENST00000342245 LSM14BQ9BX40 385 aaKnown RBP19.96■□□□□ 0.79
SMPD1-201ENST00000342245 SPATA16Q9BXB7 569 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 TBC1D10AQ9BXI6 508 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 BCORQ6W2J9 1755 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 CNTNAP5Q8WYK1 1306 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 NKRFO15226 690 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMPD1-201ENST00000342245 RIPK2O43353 540 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 PLEKHA8P1O95397 391 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 MARK3P27448 753 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 PABPC4Q13310 644 aaKnown RBP eCLIP19.96■□□□□ 0.79
SMPD1-201ENST00000342245 CNPY1Q3B7I2 92 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 LRRC37BQ96QE4 947 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 MYLK2Q9H1R3 596 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 METTL14Q9HCE5 456 aaKnown RBP19.96■□□□□ 0.79
SMPD1-201ENST00000342245 AMFRQ9UKV5 643 aa19.96■□□□□ 0.79
SMPD1-201ENST00000342245 PCDH11XQ9BZA7 1347 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 GNA14O95837 355 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 FAM200BP0CF97 657 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 HSPA6P17066 643 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 PLCG1P19174 1290 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 MCL1Q07820 350 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 ZDHHC24Q6UX98 284 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 BARGINQ6ZT62 677 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 SMC1BQ8NDV3 1235 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 ARHGEF2Q92974 986 aaKnown RBP19.95■□□□□ 0.78
SMPD1-201ENST00000342245 OCEL1Q9H607 264 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 SH3GLB2Q9NR46 395 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 RREB1Q92766 1687 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 ATAD5Q96QE3 1844 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 KIAA0391O15091 583 aaKnown RBP19.95■□□□□ 0.78
SMPD1-201ENST00000342245 PHKG2P15735 406 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 STX2P32856 288 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 MGAT5Q09328 741 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 STRN3Q13033 797 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 IFIT1BQ5T764 474 aaKnown RBP19.95■□□□□ 0.78
SMPD1-201ENST00000342245 SNX30Q5VWJ9 437 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 LRRC55Q6ZSA7 311 aa19.95■□□□□ 0.78
SMPD1-201ENST00000342245 TRMT10CQ7L0Y3 403 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms