RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 ACTR2P61160 394 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 SP2Q02086 613 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 ORC2Q13416 577 aaPredicted RBP14.28□□□□□ -0.12
COL18A1-201ENST00000342220 LBX2Q6XYB7 198 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 RNF217Q8TC41 542 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 TRAPPC12Q8WVT3 735 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 MAGEF1Q9HAY2 307 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 TRPC6Q9Y210 931 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 PCDHA10Q9Y5I2 948 aa14.28□□□□□ -0.12
COL18A1-201ENST00000342220 PVALEFA0A1B0GWK0 134 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 TTC26A0AVF1 554 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 SPDYE5A6NIY4 337 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 CYP3A4P08684 503 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 ACTN2P35609 894 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 POLGP54098 1239 aaPredicted RBP14.27□□□□□ -0.12
COL18A1-201ENST00000342220 FKBP3Q00688 224 aaKnown RBP14.27□□□□□ -0.12
COL18A1-201ENST00000342220 CYP27A1Q02318 531 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 CCDC60Q8IWA6 550 aaPredicted RBP14.27□□□□□ -0.12
COL18A1-201ENST00000342220 FAM114A1Q8IWE2 563 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 SAAL1Q96ER3 474 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 ZNHIT6Q9NWK9 470 aaKnown RBP14.27□□□□□ -0.12
COL18A1-201ENST00000342220 RBPJLQ9UBG7 517 aa14.27□□□□□ -0.12
COL18A1-201ENST00000342220 MYH7BA7E2Y1 1941 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 SRGAP2CP0DJJ0 459 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 PPP2R5AQ15172 486 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 PRAMEF19Q5SWL8 479 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 FAM43BQ6ZT52 329 aaPredicted RBP14.27□□□□□ -0.13
COL18A1-201ENST00000342220 DNAAF5Q86Y56 855 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 LRRC71Q8N4P6 559 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 CRYGNQ8WXF5 182 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 SIPA1L1O43166 1804 aa14.27□□□□□ -0.13
COL18A1-201ENST00000342220 BTBD19C9JJ37 291 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 IPO7O95373 1038 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 ACTN1P12814 892 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 SEZ6Q53EL9 994 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 BEND6Q5SZJ8 279 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 FOXR1Q6PIV2 292 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 NDST4Q9H3R1 872 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 TBC1D22BQ9NU19 505 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 REXO2Q9Y3B8 237 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 GREB1LQ9C091 1923 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 MAP2K7O14733 419 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 LMBRD2Q68DH5 695 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 FASTKD5Q7L8L6 764 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 GUF1Q8N442 669 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 MB21D1Q8N884 522 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 PPM1EQ8WY54 764 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 ABCB6Q9NP58 842 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 LARSQ9P2J5 1176 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 ANKFY1Q9P2R3 1169 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 ADAM21Q9UKJ8 722 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 GUCA1BQ9UMX6 200 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 AGTPBP1Q9UPW5 1226 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 DLATP10515 647 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 POLR2FP61218 127 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 OSTNP61366 133 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 PRKCEQ02156 737 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 MOXD1Q6UVY6 613 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 MSANTD4Q8NCY6 345 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 LSM14BQ9BX40 385 aaKnown RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 AZI2Q9H6S1 392 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 ARMCX3Q9UH62 379 aaPredicted RBP14.26□□□□□ -0.13
COL18A1-201ENST00000342220 UBIAD1Q9Y5Z9 338 aa14.26□□□□□ -0.13
COL18A1-201ENST00000342220 SSC5DA1L4H1 1573 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 TXNP10599 105 aaKnown RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 ALDH5A1P51649 535 aaPredicted RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 CDR1P51861 262 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 TRIM14Q14142 442 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 SKIDA1Q1XH10 827 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 PDE11AQ9HCR9 933 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 RAB21Q9UL25 225 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 SYNPO2Q9UMS6 1093 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 EPN1Q9Y6I3 576 aaPredicted RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 CTAGE15A4D2H0 777 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 RGS20O76081 388 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 FGFR1OPO95684 399 aaKnown RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 MYL1P05976 194 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 CTAGE8P0CG41 777 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 CYP2B6P20813 491 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 VSNL1P62760 191 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 ERVK-9P63128 1117 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 ARHGAP44Q17R89 818 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 CTAGE6Q86UF2 777 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 CTAGE4Q8IX94 777 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 NOA1Q8NC60 698 aaKnown RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 SPAG5Q96R06 1193 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 RIT2Q99578 217 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 SOWAHBA6NEL2 793 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 KIF1CO43896 1103 aaKnown RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 PLA2G6O60733 806 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 NDUFA10O95299 355 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 GJB1P08034 283 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 RARRES1P49788 294 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 PSMC5P62195 406 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 KNOP1Q1ED39 458 aaKnown RBP14.25□□□□□ -0.13
COL18A1-201ENST00000342220 KIAA1328Q86T90 577 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 SPATA33Q96N06 139 aa14.25□□□□□ -0.13
COL18A1-201ENST00000342220 PPP2R5CQ13362 524 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 TUBB2AQ13885 445 aa14.24□□□□□ -0.13
COL18A1-201ENST00000342220 LENG1Q96BZ8 264 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms