RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 PEX26Q7Z412 305 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 KLHL7Q8IXQ5 586 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 METTL13Q8N6R0 699 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.85■□□□□ 0.134e-22■□□□□ 10.4
TDP2-201ENST00000341060 ZNF577Q9BSK1 485 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 STK33Q9BYT3 514 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 ISCUQ9H1K1 167 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 PLEKHA4Q9H4M7 779 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 TAF1DQ9H5J8 278 aaPredicted RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 AGPAT3Q9NRZ7 376 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 SUCLA2Q9P2R7 463 aaPredicted RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 FEZ2Q9UHY8 353 aaPredicted RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 ZBTB21Q9ULJ3 1066 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 STXBP5LQ9Y2K9 1186 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 MRPL11Q9Y3B7 192 aaKnown RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 GRIN2DO15399 1336 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 SPDYE2BA6NHP3 402 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 TCP10L2B9ZVM9 353 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 CEP104O60308 925 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 PLA2G6O60733 806 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 KRT14P02533 472 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 SPDYE6P0CI01 402 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 IRAK1P51617 712 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 UBXN2AP68543 259 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 CFAP58Q5T655 872 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 KSR1Q8IVT5 923 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 CD302Q8IX05 232 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 RASGEF1CQ8N431 466 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 LNX1Q8TBB1 728 aaPredicted RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 UNC45AQ9H3U1 944 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 RSPH14Q9UHP6 348 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 FRMD4BQ9Y2L6 1034 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 NOC2LQ9Y3T9 749 aaKnown RBP15.85■□□□□ 0.13
TDP2-201ENST00000341060 DAAM1Q9Y4D1 1078 aa15.85■□□□□ 0.13
TDP2-201ENST00000341060 ZNF233A6NK53 670 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 CCDC188H7C350 402 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 LMNB1P20700 586 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 GUCY2CP25092 1073 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 SKOR1P84550 965 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 CBWD6Q4V339 395 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 CBWD3Q5JTY5 395 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 CBWD5Q5RIA9 395 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 ODR4Q5SWX8 454 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 DAAM2Q86T65 1068 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 NT5DC3Q86UY8 548 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 FMNL3Q8IVF7 1028 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 U2AF1L4Q8WU68 220 aaKnown RBP15.84■□□□□ 0.13
TDP2-201ENST00000341060 PIK3R5Q8WYR1 880 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 LXNQ9BS40 222 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 SYT11Q9BT88 431 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 GPR88Q9GZN0 384 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 NCANO14594 1321 aa15.84■□□□□ 0.13
TDP2-201ENST00000341060 A6NNZ2 444 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 TMCO5BA8MYB1 307 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 BHMG1C9JSJ3 638 aaPredicted RBP15.83■□□□□ 0.13
TDP2-201ENST00000341060 PPP1R37O75864 691 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 GUCY2FP51841 1108 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 GALCP54803 685 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 CUL1Q13616 776 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 DRAP1Q14919 205 aaPredicted RBP15.83■□□□□ 0.13
TDP2-201ENST00000341060 TRADDQ15628 312 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 TUBB8Q3ZCM7 444 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 SLC9A9Q8IVB4 645 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 SUPT20HQ8NEM7 779 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 FAM151AQ8WW52 585 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 HES6Q96HZ4 224 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 STRA6Q9BX79 667 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 TEKT3Q9BXF9 490 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 VCPKMTQ9H867 229 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 APEX2Q9UBZ4 518 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 DNAJC12Q9UKB3 198 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 WDR81Q562E7 1941 aa15.83■□□□□ 0.13
TDP2-201ENST00000341060 IPO5O00410 1097 aaKnown RBP15.83■□□□□ 0.12
TDP2-201ENST00000341060 EIF3HO15372 352 aaKnown RBP eCLIP15.83■□□□□ 0.12
TDP2-201ENST00000341060 PPIP5K2O43314 1243 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 ARP10275 920 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 ECHS1P30084 290 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 HSPA9P38646 679 aaKnown RBP15.83■□□□□ 0.12
TDP2-201ENST00000341060 CYP2J2P51589 502 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 ERVK-9P63128 1117 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 FAM160B2Q86V87 743 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 GLYCTKQ8IVS8 523 aa15.83■□□□□ 0.12
TDP2-201ENST00000341060 SART1O43290 800 aaKnown RBP15.82■□□□□ 0.12
TDP2-201ENST00000341060 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 CCDC172P0C7W6 258 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 DPEP1P16444 411 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 MYL7Q01449 175 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 BFSP1Q12934 665 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 PTPROQ16827 1216 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 C1orf131Q8NDD1 294 aaKnown RBP15.82■□□□□ 0.12
TDP2-201ENST00000341060 NEK9Q8TD19 979 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 RFFLQ8WZ73 363 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 RIT2Q99578 217 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 DEFB129Q9H1M3 183 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 CNTNAP1P78357 1384 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 CLRN2A0PK11 232 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 C21orf2O43822 256 aa15.82■□□□□ 0.12
TDP2-201ENST00000341060 TRIM49P0CI25 452 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms