RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 CUL1Q13616 776 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 GLE1Q53GS7 698 aaKnown RBP13.82□□□□□ -0.2
DNMT1-201ENST00000340748 DSTYKQ6XUX3 929 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 CAPN12Q6ZSI9 719 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 SNX25Q9H3E2 840 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 BARHL2Q9NY43 387 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 STK38LQ9Y2H1 464 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 MCF2LO15068 1137 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 SRGAP2BP0DMP2 458 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 ABHD10Q9NUJ1 306 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 GH1P01241 217 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 OSTNP61366 133 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 CCDC197Q8NCU1 140 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 NEK9Q8TD19 979 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 OXER1Q8TDS5 423 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 GJB4Q9NTQ9 266 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 LCMT1Q9UIC8 334 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 MAD1L1Q9Y6D9 718 aa13.82□□□□□ -0.2
DNMT1-201ENST00000340748 PLTPP55058 493 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 EIF3BP55884 814 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 TYW5A2RUC4 315 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 KLRK1P26718 216 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 ANXA13P27216 316 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 PPP2R5CQ13362 524 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 KCTD16Q68DU8 428 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 ATG9AQ7Z3C6 839 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 HTATIP2Q9BUP3 242 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 NMRK2Q9NPI5 230 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 GINM1Q9NU53 330 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 ZNF233A6NK53 670 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 EXOSC10Q01780 885 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 MYO1EQ12965 1108 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 ALKBH5Q6P6C2 394 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 RPUSD2Q8IZ73 545 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 CCDC188H7C350 402 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 SLC8A1P32418 973 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 CPT1AP50416 773 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 CLCN6P51797 869 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 TFAMQ00059 246 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 TNFAIP2Q03169 654 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 SF3A3Q12874 501 aaKnown RBP eCLIP13.81□□□□□ -0.23e-6■■■■■ 28.3
DNMT1-201ENST00000340748 SCYL1Q96KG9 808 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 PPP1R12CQ9BZL4 782 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 USH1CQ9Y6N9 552 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 SCINQ9Y6U3 715 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 GOLGA8CPA6NN73 597 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 POC1B-GALNT4F8VUJ3 575 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 DHX9Q08211 1270 aaKnown RBP13.81□□□□□ -0.2
DNMT1-201ENST00000340748 RPS6KA2Q15349 733 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 SH2D4BQ5SQS7 431 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 ATP8A1Q9Y2Q0 1164 aa13.81□□□□□ -0.2
DNMT1-201ENST00000340748 ANO9A1A5B4 782 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 EVI5O60447 810 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 HIP1RO75146 1068 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 CXCR5P32302 372 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 DR1Q01658 176 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 ITKQ08881 620 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 ARHGEF18Q6ZSZ5 1173 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 VCPKMTQ9H867 229 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 KIAA1586Q9HCI6 787 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 DEPDC5O75140 1603 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 CYP27A1Q02318 531 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 SP3Q02447 781 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 CYP4F22Q6NT55 531 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 EMBQ6PCB8 327 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 CAPNS2Q96L46 248 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 TBC1D22BQ9NU19 505 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 HMX1Q9NP08 348 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-201ENST00000340748 FAN1Q9Y2M0 1017 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 GOLGA8QA0A0J9YX86 632 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 GOLGA8OA6NCC3 632 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 GOLGA8NF8WBI6 632 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 NMT2O60551 498 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 ZMYND10O75800 440 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 ZNF512BQ96KM6 892 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-201ENST00000340748 MSTO1Q9BUK6 570 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 ZDHHC9Q9Y397 364 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 PFASO15067 1338 aa13.8□□□□□ -0.2
DNMT1-201ENST00000340748 PRCPP42785 496 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 TOGARAM2Q6ZUX3 1019 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 EXOC4Q96A65 974 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 HINFPQ9BQA5 517 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 STARD7Q9NQZ5 370 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 KIF13AQ9H1H9 1805 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 ARHGAP42A6NI28 874 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 ZWINTO95229 277 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 PHKA2P46019 1235 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 RWDD2BP57060 319 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 COASYQ13057 564 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 SNX1Q13596 522 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
DNMT1-201ENST00000340748 RSRC2Q7L4I2 434 aaKnown RBP13.79□□□□□ -0.2
DNMT1-201ENST00000340748 GCOM2Q9BZD3 368 aaPredicted RBP13.79□□□□□ -0.2
DNMT1-201ENST00000340748 CPVLQ9H3G5 476 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 MROH2AA6NES4 1674 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 POTEMA6NI47 508 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 GOLGA8SH3BPF8 625 aa13.79□□□□□ -0.2
DNMT1-201ENST00000340748 NR3C1P04150 777 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms