RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 UBE2TQ9NPD8 197 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 LRRC4BQ9NT99 713 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 ATF5Q9Y2D1 282 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 DLEC1Q9Y238 1755 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 PDXKO00764 312 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 PPEF1O14829 653 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 RPA1P27694 616 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 PSMC2P35998 433 aaKnown RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 KCNJ1P48048 391 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 NSMFQ6X4W1 530 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 CACNA2D3Q8IZS8 1091 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 SYCE1Q8N0S2 351 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 ACTRT1Q8TDG2 376 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 C18orf8Q96DM3 657 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 GOLGA6L10A0A0M3HER8 536 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 A6NNZ2 444 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 ECM2O94769 699 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 FERP16591 822 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 FGFR4P22455 802 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 TUBB8Q3ZCM7 444 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 UBAP2Q5T6F2 1119 aaKnown RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 BANK1Q8NDB2 785 aa15.61■□□□□ 0.09
CPSF7-201ENST00000340437 METTL14Q9HCE5 456 aaKnown RBP15.61■□□□□ 0.09
CPSF7-201ENST00000340437 SOX5P35711 763 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 MARCKSL1P49006 195 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 VPS41P49754 854 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 LRCH2Q5VUJ6 765 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 RINT1Q6NUQ1 792 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 SEC16BQ96JE7 1060 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 AZI2Q9H6S1 392 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 SIX2Q9NPC8 291 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 CD2APQ9Y5K6 639 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 GAKO14976 1311 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 GOLGA8IPA6NC78 632 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 GOLGA8JA6NMD2 632 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 FOXN3O00409 490 aaPredicted RBP15.6■□□□□ 0.09
CPSF7-201ENST00000340437 BBOX1O75936 387 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 GH2P01242 217 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 SNX1Q13596 522 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 PPP1R18Q6NYC8 613 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 TMC3Q7Z5M5 1100 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 CPNE8Q86YQ8 564 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
CPSF7-201ENST00000340437 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.6■□□□□ 0.09
CPSF7-201ENST00000340437 TGFB1I1O43294 461 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 GCLMP48507 274 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 LRRC14Q15048 493 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 C10orf76Q5T2E6 689 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 MREGQ8N565 214 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 DNAJC18Q9H819 358 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 TRAF3IP3Q9Y228 551 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 CRKP46108 304 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 FMO5P49326 533 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 TRIP13Q15645 432 aaPredicted RBP15.59■□□□□ 0.09
CPSF7-201ENST00000340437 CCDC105Q8IYK2 499 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 ETNPPLQ8TBG4 499 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 FBXO25Q8TCJ0 367 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 DYDC1Q8WWB3 177 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 PSMD1Q99460 953 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.59■□□□□ 0.09
CPSF7-201ENST00000340437 DBR1Q9UK59 544 aaKnown RBP15.59■□□□□ 0.09
CPSF7-201ENST00000340437 LAMB1P07942 1786 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 COL14A1Q05707 1796 aaKnown RBP15.59■□□□□ 0.09
CPSF7-201ENST00000340437 NDUFB10O96000 172 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 CPP00450 1065 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 MTMR3Q13615 1198 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 KRT35Q92764 455 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 TBC1D31Q96DN5 1066 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 FAM163AQ96GL9 167 aaPredicted RBP15.59■□□□□ 0.09
CPSF7-201ENST00000340437 TMEM59LQ9UK28 342 aa15.59■□□□□ 0.09
CPSF7-201ENST00000340437 FOXO6A8MYZ6 492 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 CCDC188H7C350 402 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 GAS7O60861 476 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 GYS1P13807 737 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 NT5C2P49902 561 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 IFI35P80217 286 aaPredicted RBP15.58■□□□□ 0.09
CPSF7-201ENST00000340437 MYL7Q01449 175 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 FAM133BQ5BKY9 247 aaKnown RBP15.58■□□□□ 0.09
CPSF7-201ENST00000340437 DENND2CQ68D51 928 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 ALG3Q92685 438 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 NAP1L4Q99733 375 aaKnown RBP15.58■□□□□ 0.09
CPSF7-201ENST00000340437 INTS2Q9H0H0 1204 aaKnown RBP15.58■□□□□ 0.09
CPSF7-201ENST00000340437 KLC4Q9NSK0 619 aa15.58■□□□□ 0.09
CPSF7-201ENST00000340437 IGKV6D-41A0A0C4DH26 115 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 F8VZ95 297 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 CALCAP01258 141 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 FTLP02792 175 aaPredicted RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 MARSP56192 900 aaKnown RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 SLC29A2Q14542 456 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 GKAP1Q5VSY0 366 aaPredicted RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 CD302Q8IX05 232 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 PARVGQ9HBI0 331 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 SLC40A1Q9NP59 571 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 SUCLA2Q9P2R7 463 aaPredicted RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 PITPNM2Q9BZ72 1349 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 H0YGN5 161 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 OPLAHO14841 1288 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 RGS16O15492 202 aaPredicted RBP15.58■□□□□ 0.08
CPSF7-201ENST00000340437 DLG4P78352 724 aa15.58■□□□□ 0.08
CPSF7-201ENST00000340437 SPIRE1Q08AE8 756 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms