RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 APBA2Q99767 749 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 COLEC11Q9BWP8 271 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 RBAKQ9NYW8 714 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 C2CD2LO14523 706 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 NNMTP40261 264 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 RSAD2Q8WXG1 361 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 ABCC6O95255 1503 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 AMHP03971 560 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 ZNF286BP0CG31 522 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 MAP2K5Q13163 448 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 HAUS6Q7Z4H7 955 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
LIN54-201ENST00000340417 SECISBP2LQ93073 1101 aaKnown RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.87□□□□□ -0.19
LIN54-201ENST00000340417 NFAT5O94916 1531 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 A8MXQ7 604 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 PRKAR2AP13861 404 aaKnown RBP13.86□□□□□ -0.19
LIN54-201ENST00000340417 CATSPERGQ6ZRH7 1159 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 CCDC26Q8TAB7 109 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 STRIP2Q9ULQ0 834 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 PCDHB12Q9Y5F1 795 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 WTIPA6NIX2 430 aaPredicted RBP13.86□□□□□ -0.19
LIN54-201ENST00000340417 PITPNM2Q9BZ72 1349 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 CABYRO75952 493 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 GRK4P32298 578 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 ZNF746Q6NUN9 644 aaPredicted RBP13.86□□□□□ -0.19
LIN54-201ENST00000340417 RINT1Q6NUQ1 792 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 PPP1R2P3Q6NXS1 205 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 GPR142Q7Z601 462 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 SAAL1Q96ER3 474 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 TRIM11Q96F44 468 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 PRG3Q9Y2Y8 225 aaPredicted RBP13.86□□□□□ -0.19
LIN54-201ENST00000340417 GRIK1P39086 918 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 RESTQ13127 1097 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 SPRYD7Q5W111 196 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 GPD1LQ8N335 351 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 RDM1Q8NG50 284 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 MAIP1Q8WWC4 291 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 TBC1D31Q96DN5 1066 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 TIGD1Q96MW7 591 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 FLT3LGP49771 235 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 ANKRD23Q86SG2 305 aa13.86□□□□□ -0.19
LIN54-201ENST00000340417 GPR161Q8N6U8 529 aaKnown RBP13.86□□□□□ -0.19
LIN54-201ENST00000340417 PARP4Q9UKK3 1724 aaKnown RBP13.85□□□□□ -0.19
LIN54-201ENST00000340417 NFKBIEO00221 500 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 MAN2A1Q16706 1144 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 KLRG1Q96E93 195 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 PRMT7Q9NVM4 692 aaPredicted RBP13.85□□□□□ -0.19
LIN54-201ENST00000340417 EXOSC10Q01780 885 aaKnown RBP13.85□□□□□ -0.19
LIN54-201ENST00000340417 COASYQ13057 564 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 UAP1Q16222 522 aaPredicted RBP13.85□□□□□ -0.19
LIN54-201ENST00000340417 PTGISQ16647 500 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 YDJCA8MPS7 323 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 SH3BP5O60239 455 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 ARL4AP40617 200 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 IQSEC1Q6DN90 963 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 DNAJC24Q6P3W2 148 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 NCAPGQ9BPX3 1015 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 TINF2Q9BSI4 451 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 IFIH1Q9BYX4 1025 aaKnown RBP13.85□□□□□ -0.19
LIN54-201ENST00000340417 NPTXRO95502 500 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 FSTL1Q12841 308 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 LY6KQ17RY6 165 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 MRC1P22897 1456 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 PIK3C2AO00443 1686 aa13.85□□□□□ -0.19
LIN54-201ENST00000340417 LRG1P02750 347 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 CCNE1P24864 410 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 ALDH5A1P51649 535 aaPredicted RBP13.84□□□□□ -0.19
LIN54-201ENST00000340417 PRPSAP1Q14558 356 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 DUOXA2Q1HG44 320 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 AMFRQ9UKV5 643 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 RALAP11233 206 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 NFKBIAP25963 317 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 LRRC63Q05C16 580 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 HS1BP3Q53T59 392 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 GAKO14976 1311 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 H3BRB1 525 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 MFSD10Q14728 455 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 TSGA10IPQ3SY00 556 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 TUT1Q9H6E5 874 aaKnown RBP13.84□□□□□ -0.19
LIN54-201ENST00000340417 AHDC1Q5TGY3 1603 aaPredicted RBP13.84□□□□□ -0.19
LIN54-201ENST00000340417 TBC1D12O60347 775 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 NR3C1P04150 777 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 ADORA2BP29275 332 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 COPB1P53618 953 aaKnown RBP13.84□□□□□ -0.19
LIN54-201ENST00000340417 RIOX2Q8IUF8 465 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 SYTL5Q8TDW5 730 aaPredicted RBP13.84□□□□□ -0.19
LIN54-201ENST00000340417 SEPT5Q99719 369 aaPredicted RBP13.84□□□□□ -0.19
LIN54-201ENST00000340417 PP2D1A8MPX8 630 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 PFDN6O15212 129 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 CEP104O60308 925 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 CRCPO75575 148 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 HMGCRP04035 888 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 ATF7IP2Q5U623 682 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 SPECC1LQ69YQ0 1117 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 ZNF449Q6P9G9 518 aa13.84□□□□□ -0.19
LIN54-201ENST00000340417 DAAM2Q86T65 1068 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms