RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 KIAA1671Q9BY89 1806 aa16.35■□□□□ 0.21
ERCC1-203ENST00000340192 POTEMA6NI47 508 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 GTPBP6O43824 516 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 DGKIO75912 1065 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 DARSP14868 501 aaKnown RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 POU3F3P20264 500 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 IBSPP21815 317 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 TRAPPC10P48553 1259 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 POLGP54098 1239 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 CDC42EP1Q00587 391 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 NBR1Q14596 966 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 MICALL1Q8N3F8 863 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 FBXO22Q8NEZ5 403 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 SLC7A3Q8WY07 619 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 ZNF689Q96CS4 500 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 JPH2Q9BR39 696 aaPredicted RBP16.34■□□□□ 0.21
ERCC1-203ENST00000340192 RGS18Q9NS28 235 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 PPME1Q9Y570 386 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 VCANP13611 3396 aa16.34■□□□□ 0.21
ERCC1-203ENST00000340192 FNDC1Q4ZHG4 1894 aaPredicted RBP16.33■□□□□ 0.21
ERCC1-203ENST00000340192 LYPLA2O95372 231 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 OR52Z1P0C646 297 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 STAG3L1P0CL83 205 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 RFC5P40937 340 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 TECP42680 631 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
ERCC1-203ENST00000340192 TOB1P50616 345 aaPredicted RBP16.33■□□□□ 0.2
ERCC1-203ENST00000340192 EPC2Q52LR7 807 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 XKR9Q5GH70 373 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 RHPN2Q8IUC4 686 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 EXOC8Q8IYI6 725 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 FIBCD1Q8N539 461 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 NEK9Q8TD19 979 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 SAMD11Q96NU1 681 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 DHX33Q9H6R0 707 aaKnown RBP16.33■□□□□ 0.2
ERCC1-203ENST00000340192 C1orf112Q9NSG2 853 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 BMP2KQ9NSY1 1161 aaPredicted RBP16.33■□□□□ 0.2
ERCC1-203ENST00000340192 LRFN2Q9ULH4 789 aa16.33■□□□□ 0.2
ERCC1-203ENST00000340192 PRRC2BQ5JSZ5 2229 aaKnown RBP16.33■□□□□ 0.2
ERCC1-203ENST00000340192 A0A087WZ62 844 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 C9IYK1 514 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 CSDE1O75534 798 aaKnown RBP16.32■□□□□ 0.2
ERCC1-203ENST00000340192 FGFR4P22455 802 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 BTG3Q14201 252 aaPredicted RBP16.32■□□□□ 0.2
ERCC1-203ENST00000340192 DSC3Q14574 896 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 SLC24A5Q71RS6 500 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 KSR1Q8IVT5 923 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 TMEM192Q8IY95 271 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 C4orf32Q8N8J7 132 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 TMEM143Q96AN5 459 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 FDXACB1Q9BRP7 624 aaPredicted RBP16.32■□□□□ 0.2
ERCC1-203ENST00000340192 GCOM2Q9BZD3 368 aaPredicted RBP16.32■□□□□ 0.2
ERCC1-203ENST00000340192 PRDM6Q9NQX0 595 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 SMC3Q9UQE7 1217 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.32■□□□□ 0.2
ERCC1-203ENST00000340192 PCDHB7Q9Y5E2 793 aa16.32■□□□□ 0.2
ERCC1-203ENST00000340192 H3BQV1 296 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 LINC00271P0C7V0 271 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 SPATA31C1P0DKV0 1188 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 EMC2Q15006 297 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 ZNF410Q86VK4 478 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 PRPF31Q8WWY3 499 aaKnown RBP16.31■□□□□ 0.2
ERCC1-203ENST00000340192 NLRP4Q96MN2 994 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 ANKEF1Q9NU02 776 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 PCDHB6Q9Y5E3 794 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 COL4A3BPQ9Y5P4 624 aa16.31■□□□□ 0.2
ERCC1-203ENST00000340192 SPTBN5Q9NRC6 3674 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 ATG2AQ2TAZ0 1938 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 A0A087WWV3 80 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 GAS2O43903 313 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 ZSCAN20P17040 1043 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 CTNNB1P35222 781 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 GATMP50440 423 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 FAM189BP81408 668 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 PAN2Q504Q3 1202 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 CATSPER3Q86XQ3 398 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 CMTR2Q8IYT2 770 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 PIGOQ8TEQ8 1089 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 PSPC1Q8WXF1 523 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 CLP1Q92989 425 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 RNF216Q9NWF9 866 aaPredicted RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 LMCD1Q9NZU5 365 aa16.3■□□□□ 0.2
ERCC1-203ENST00000340192 MRPL42Q9Y6G3 142 aaKnown RBP16.3■□□□□ 0.2
ERCC1-203ENST00000340192 H3BNC9 293 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 MED24O75448 989 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 SRGAP2CP0DJJ0 459 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
ERCC1-203ENST00000340192 BMPR1AP36894 532 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 FXR2P51116 673 aaKnown RBP eCLIP16.29■□□□□ 0.2
ERCC1-203ENST00000340192 LAMTOR4Q0VGL1 99 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 PTGDRQ13258 359 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 GPM6BQ13491 265 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 LARP1BQ659C4 914 aaKnown RBP16.29■□□□□ 0.2
ERCC1-203ENST00000340192 ERMNQ8TAM6 284 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 TCP11Q8WWU5 503 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 MTRQ99707 1265 aa16.29■□□□□ 0.2
ERCC1-203ENST00000340192 POLR3CQ9BUI4 534 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms