RNA–Protein interactions for RNA: ENST00000339436.11

SRSF3-201, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 1,518 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-201ENST00000339436 DNM3Q9UQ16 869 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 GINS2Q9Y248 185 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 SQORQ9Y6N5 450 aa14.31□□□□□ -0.12
SRSF3-201ENST00000339436 E9PMD0 336 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 EYA4O95677 639 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 FGBP02675 491 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 ACTN1P12814 892 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 CRYBB1P53674 252 aaPredicted RBP14.3□□□□□ -0.12
SRSF3-201ENST00000339436 NLRP11P59045 1033 aaKnown RBP14.3□□□□□ -0.12
SRSF3-201ENST00000339436 KARSQ15046 597 aaKnown RBP14.3□□□□□ -0.12
SRSF3-201ENST00000339436 TCTN1Q2MV58 587 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 SPECC1Q5M775 1068 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 RASIP1Q5U651 963 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 PADI6Q6TGC4 694 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 USP49Q70CQ1 688 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 OTOP2Q7RTS6 562 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 USP38Q8NB14 1042 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 MCPH1Q8NEM0 835 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 TMEM40Q8WWA1 233 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 TCP11Q8WWU5 503 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 PSPC1Q8WXF1 523 aaKnown RBP14.3□□□□□ -0.12
SRSF3-201ENST00000339436 HERVK_113Q902F9 699 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 TMEM143Q96AN5 459 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 CALML4Q96GE6 196 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 EPSTI1Q96J88 318 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 OSMRQ99650 979 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 IFIH1Q9BYX4 1025 aaKnown RBP14.3□□□□□ -0.12
SRSF3-201ENST00000339436 ADAMTS10Q9H324 1103 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 TSHZ2Q9NRE2 1034 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 CIZ1Q9ULV3 898 aaPredicted RBP14.3□□□□□ -0.12
SRSF3-201ENST00000339436 COL4A3BPQ9Y5P4 624 aa14.3□□□□□ -0.12
SRSF3-201ENST00000339436 BAIAP3O94812 1187 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 PLCG1P19174 1290 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 NCLP19338 710 aaKnown RBP14.29□□□□□ -0.12
SRSF3-201ENST00000339436 TXLNAP40222 546 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 RHPN2Q8IUC4 686 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 DBF4BQ8NFT6 615 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 RASSF8Q8NHQ8 419 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 LRRC15Q8TF66 581 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 SEPT8Q92599 483 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 SCLT1Q96NL6 688 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 PLIN2Q99541 437 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 MTIF3Q9H2K0 278 aaKnown RBP14.29□□□□□ -0.12
SRSF3-201ENST00000339436 AGO3Q9H9G7 860 aaKnown RBP14.29□□□□□ -0.12
SRSF3-201ENST00000339436 CDHR5Q9HBB8 845 aa14.29□□□□□ -0.12
SRSF3-201ENST00000339436 CXXC1Q9P0U4 656 aaPredicted RBP14.29□□□□□ -0.12
SRSF3-201ENST00000339436 CUTAO60888 179 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 CYP11B2P19099 503 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 ME1P48163 572 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 CDC42EP1Q00587 391 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 PAK2Q13177 524 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 AXDND1Q5T1B0 1012 aaPredicted RBP14.28□□□□□ -0.12
SRSF3-201ENST00000339436 ZNF410Q86VK4 478 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 KSR1Q8IVT5 923 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 PRPF31Q8WWY3 499 aaKnown RBP14.28□□□□□ -0.12
SRSF3-201ENST00000339436 NLRP7Q8WX94 980 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 APBB2Q92870 758 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 ZNF668Q96K58 619 aaPredicted RBP14.28□□□□□ -0.12
SRSF3-201ENST00000339436 NLRP4Q96MN2 994 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 RCOR1Q9UKL0 485 aa14.28□□□□□ -0.12
SRSF3-201ENST00000339436 DARSP14868 501 aaKnown RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 EIF4BP23588 611 aaKnown RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 CD52P31358 61 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 ARL2P36404 184 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 SLC12A3P55017 1021 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 LAMTOR4Q0VGL1 99 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 MXD4Q14582 209 aaPredicted RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 FAM228AQ86W67 206 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 LEO1Q8WVC0 666 aaPredicted RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 RUSC1Q9BVN2 902 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 POLR3FQ9H1D9 316 aaPredicted RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 GPRC5CQ9NQ84 441 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 BLOC1S4Q9NUP1 217 aa14.27□□□□□ -0.12
SRSF3-201ENST00000339436 NOC2LQ9Y3T9 749 aaKnown RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 RBM19Q9Y4C8 960 aaKnown RBP14.27□□□□□ -0.12
SRSF3-201ENST00000339436 A0A087WZ62 844 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 ABHD14A-ACY1A0A1B0GW23 586 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 ZBBXA8MT70 800 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 EFCAB14O75071 495 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 RPS6KA5O75582 802 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 PLA2G4BP0C869 781 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 WDR5P61964 334 aaKnown RBP14.26□□□□□ -0.13
SRSF3-201ENST00000339436 IKBKEQ14164 716 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 SHC4Q6S5L8 630 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 SYT2Q8N9I0 419 aaPredicted RBP14.26□□□□□ -0.13
SRSF3-201ENST00000339436 ASAP3Q8TDY4 903 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 SPATA32Q96LK8 384 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 FDXACB1Q9BRP7 624 aaPredicted RBP14.26□□□□□ -0.13
SRSF3-201ENST00000339436 SCAND2PQ9GZW5 306 aaPredicted RBP14.26□□□□□ -0.13
SRSF3-201ENST00000339436 IFT122Q9HBG6 1241 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 ERVK-5Q9HDB9 667 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 STK17AQ9UEE5 414 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 CCDC39Q9UFE4 941 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 PADI3Q9ULW8 664 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 PCDHA7Q9UN72 937 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 FNDC1Q4ZHG4 1894 aaPredicted RBP14.26□□□□□ -0.13
SRSF3-201ENST00000339436 NLRC5Q86WI3 1866 aa14.26□□□□□ -0.13
SRSF3-201ENST00000339436 A0A087X0B3 334 aa14.25□□□□□ -0.13
SRSF3-201ENST00000339436 ASAP2O43150 1006 aa14.25□□□□□ -0.13
SRSF3-201ENST00000339436 SSBP05455 408 aaKnown RBP eCLIP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms