RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ACAD9Q9H845 621 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 OGFRQ9NZT2 677 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 CEP72Q9P209 647 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 GUCA1BQ9UMX6 200 aa12.16□□□□□ -0.46
LRP1-202ENST00000338962 KRT86O43790 486 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 ABL1P00519 1130 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 EPB41P11171 864 aaKnown RBP12.15□□□□□ -0.46
LRP1-202ENST00000338962 CBX1P83916 185 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 KCNH2Q12809 1159 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 ERCC6LQ2NKX8 1250 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 CCDC122Q5T0U0 273 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 XRRA1Q6P2D8 792 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 HS2ST1Q7LGA3 356 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 NCAPG2Q86XI2 1143 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 SLC35F6Q8N357 371 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 LRRN4CLQ8ND94 238 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 EHBP1Q8NDI1 1231 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 UBXN4Q92575 508 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 CRACR2AQ9BSW2 395 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 METTL14Q9HCE5 456 aaKnown RBP12.15□□□□□ -0.46
LRP1-202ENST00000338962 UBE4BO95155 1302 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 LOXHD1Q8IVV2 1947 aa12.15□□□□□ -0.46
LRP1-202ENST00000338962 EFCAB8A8MWE9 144 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 SLC16A3O15427 465 aaKnown RBP12.15□□□□□ -0.47
LRP1-202ENST00000338962 FKTNO75072 461 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 AKAP3O75969 853 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 CTGFP29279 349 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 CCND2P30279 289 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 ZC2HC1CQ53FD0 456 aaPredicted RBP12.15□□□□□ -0.47
LRP1-202ENST00000338962 PADI6Q6TGC4 694 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 ZNF720Q7Z2F6 126 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 GPR142Q7Z601 462 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 ZNF296Q8WUU4 475 aaPredicted RBP12.15□□□□□ -0.47
LRP1-202ENST00000338962 BAP1Q92560 729 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 PURBQ96QR8 312 aaKnown RBP12.15□□□□□ -0.47
LRP1-202ENST00000338962 LSM14BQ9BX40 385 aaKnown RBP12.15□□□□□ -0.47
LRP1-202ENST00000338962 ARHGAP20Q9P2F6 1191 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 PCDHB13Q9Y5F0 798 aa12.15□□□□□ -0.47
LRP1-202ENST00000338962 WDR64B1ANS9 1081 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 CLIC2O15247 247 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 HIP1RO75146 1068 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 AFPP02771 609 aaKnown RBP12.14□□□□□ -0.47
LRP1-202ENST00000338962 JAK3P52333 1124 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 KRT76Q01546 638 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 DCAF17Q5H9S7 520 aaPredicted RBP12.14□□□□□ -0.47
LRP1-202ENST00000338962 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 ZNF662Q6ZS27 426 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 PLEKHH3Q7Z736 793 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 NSUN6Q8TEA1 469 aaKnown RBP12.14□□□□□ -0.47
LRP1-202ENST00000338962 JAKMIP2Q96AA8 810 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 NAPGQ99747 312 aaPredicted RBP12.14□□□□□ -0.47
LRP1-202ENST00000338962 NLRC4Q9NPP4 1024 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 LARSQ9P2J5 1176 aaKnown RBP12.14□□□□□ -0.47
LRP1-202ENST00000338962 TRIM10Q9UDY6 481 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 DBR1Q9UK59 544 aaKnown RBP12.14□□□□□ -0.47
LRP1-202ENST00000338962 ZMYM2Q9UBW7 1377 aa12.14□□□□□ -0.47
LRP1-202ENST00000338962 TGFB1I1O43294 461 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 AKR1B10O60218 316 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 TADA3O75528 432 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 GNRH1P01148 92 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 NR3C2P08235 984 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 PLEKP08567 350 aaPredicted RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 YWHABP31946 246 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 SFNP31947 248 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 PSMC4P43686 418 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 RARRES1P49788 294 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 KIF11P52732 1056 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 FCGRTP55899 365 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 POLR2FP61218 127 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 CAP1Q01518 475 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 KIF5AQ12840 1032 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 TUBB2AQ13885 445 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 GRB14Q14449 540 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 MORN1Q5T089 497 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 PDXDC1Q6P996 788 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 NLRX1Q86UT6 975 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 VSIG10LQ86VR7 867 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 FIZ1Q96SL8 496 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 TUBB2BQ9BVA1 445 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 A1CFQ9NQ94 594 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 GJD2Q9UKL4 321 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 DNAJC25-GNG10A0A024R161 153 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 SLC15A5A6NIM6 579 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 MAFGO15525 162 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 ATP9AO75110 1047 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 NOL4O94818 638 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 LYPLA2O95372 231 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 HSPA1AP0DMV8 641 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 HSPA1BP0DMV9 641 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 CASP4P49662 377 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 VAV2P52735 878 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 KIF22Q14807 665 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 SLC9C1Q4G0N8 1177 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 TDRD12Q587J7 1177 aaKnown RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 MAEAQ7L5Y9 396 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 GOLGA5Q8TBA6 731 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 USP6NLQ92738 828 aa12.13□□□□□ -0.47
LRP1-202ENST00000338962 SYN2Q92777 582 aaPredicted RBP12.13□□□□□ -0.47
LRP1-202ENST00000338962 GPRASP2Q96D09 838 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms