RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 UPP2O95045 317 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 STAG3L1P0CL83 205 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 ZSCAN20P17040 1043 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 ATP2C1P98194 919 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 FAM117BQ6P1L5 589 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 FERMT3Q86UX7 667 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 SNX29Q8TEQ0 813 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 TOP1MTQ969P6 601 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 GUCD1Q96NT3 240 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 CEP89Q96ST8 783 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 YME1L1Q96TA2 773 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 OSBPL7Q9BZF2 842 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 ZSCAN16Q9H4T2 348 aaPredicted RBP12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 CDHR5Q9HBB8 845 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 ATP6V0A4Q9HBG4 840 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 C1orf112Q9NSG2 853 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 DBR1Q9UK59 544 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 ST3GAL5Q9UNP4 418 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 YBX2Q9Y2T7 364 aaKnown RBP12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 MUC3AQ02505 3323 aa12.62□□□□□ -0.39
SLC28A1-202ENST00000338602 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 STX6O43752 255 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 MED24O75448 989 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 CA3P07451 260 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 SPATA31C1P0DKV0 1188 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 DARSP14868 501 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 SFPQP23246 707 aaKnown RBP eCLIP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 RARRES1P49788 294 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 TFDP1Q14186 410 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 MXD4Q14582 209 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 EMC2Q15006 297 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 IGSF22Q8N9C0 903 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 PIGOQ8TEQ8 1089 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 NLRP4Q96MN2 994 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 GAS2L1Q99501 681 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 TSPYL2Q9H2G4 693 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 TTYH1Q9H313 450 aaPredicted RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 ADAMTS10Q9H324 1103 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 ERVK-5Q9HDB9 667 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 LRFN2Q9ULH4 789 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 RBM19Q9Y4C8 960 aaKnown RBP12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 COL4A3BPQ9Y5P4 624 aa12.61□□□□□ -0.39
SLC28A1-202ENST00000338602 A0A087WZ62 844 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 ARHGEF35A5YM69 484 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 ZBTB39O15060 712 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 MYOGP15173 224 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 MKRN4PQ13434 485 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 DRP2Q13474 957 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 FAM228AQ86W67 206 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 NPAS4Q8IUM7 802 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 KCTD17Q8N5Z5 321 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 ZNF579Q8NAF0 562 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 MCPH1Q8NEM0 835 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 TMEM40Q8WWA1 233 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 PRPF31Q8WWY3 499 aaKnown RBP12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 TMEM143Q96AN5 459 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 CDK5RAP3Q96JB5 506 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 AK8Q96MA6 479 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 FDXACB1Q9BRP7 624 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 BMP2KQ9NSY1 1161 aaPredicted RBP12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 KIAA1024Q9UPX6 916 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 DNM3Q9UQ16 869 aa12.6□□□□□ -0.39
SLC28A1-202ENST00000338602 VWA3AA6NCI4 1184 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 SRGAP2CP0DJJ0 459 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 PHKA2P46019 1235 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 HTRA4P83105 476 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 NCBP1Q09161 790 aaKnown RBP12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 LAMTOR4Q0VGL1 99 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 SLC24A5Q71RS6 500 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 SRGAP1Q7Z6B7 1085 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 ZNF668Q96K58 619 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 CDX2Q99626 313 aaPredicted RBP12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 ADAM2Q99965 735 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 CHST12Q9NRB3 414 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 RGS18Q9NS28 235 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 DACT1Q9NYF0 836 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 MTMR6Q9Y217 621 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 PCDHB7Q9Y5E2 793 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
SLC28A1-202ENST00000338602 SLC26A4O43511 780 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 USO1O60763 962 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 HOXD11P31277 338 aaPredicted RBP12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 UBA7P41226 1012 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 SARSP49591 514 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 TAP1Q03518 808 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 RESTQ13127 1097 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 BECN1Q14457 450 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 GRIN2CQ14957 1233 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 SF3A1Q15459 793 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 ZRSR1Q15695 479 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 CATSPER4Q7RTX7 472 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 FIBCD1Q8N539 461 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 RNF149Q8NC42 400 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 SAMD11Q96NU1 681 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 TGS1Q96RS0 853 aaKnown RBP12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 NT5C3AQ9H0P0 336 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 TMX1Q9H3N1 280 aa12.58□□□□□ -0.4
SLC28A1-202ENST00000338602 DDX19AQ9NUU7 478 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms