RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 ARL2P36404 184 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 MAGEA10P43363 369 aaPredicted RBP17.06■□□□□ 0.32
SEC13-201ENST00000337354 SYKP43405 635 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 POU5F1BQ06416 359 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 MCM6Q14566 821 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 FSIP1Q8NA03 581 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 USP38Q8NB14 1042 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 PRPF31Q8WWY3 499 aaKnown RBP17.06■□□□□ 0.32
SEC13-201ENST00000337354 KIFAP3Q92845 792 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 DHX58Q96C10 678 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 LBHD1Q9BQE6 289 aaPredicted RBP17.06■□□□□ 0.32
SEC13-201ENST00000337354 CELF4Q9BZC1 486 aaKnown RBP17.06■□□□□ 0.32
SEC13-201ENST00000337354 C17orf75Q9HAS0 396 aa17.06■□□□□ 0.32
SEC13-201ENST00000337354 COLQQ9Y215 455 aaPredicted RBP17.06■□□□□ 0.32
SEC13-201ENST00000337354 CHRNA1P02708 482 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 SLFN14P0C7P3 912 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 ITGB8P26012 769 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 NDUFA8P51970 172 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 CRYBB1P53674 252 aaPredicted RBP17.05■□□□□ 0.32
SEC13-201ENST00000337354 MDM2Q00987 491 aaPredicted RBP17.05■□□□□ 0.32
SEC13-201ENST00000337354 MGAT3Q09327 533 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 DRP2Q13474 957 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 FAM102BQ5T8I3 360 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 TRAF7Q6Q0C0 670 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 ZNF410Q86VK4 478 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 RHPN2Q8IUC4 686 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 RPUSD2Q8IZ73 545 aaKnown RBP17.05■□□□□ 0.32
SEC13-201ENST00000337354 DRC1Q96MC2 740 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 TNMDQ9H2S6 317 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 KBTBD4Q9NVX7 518 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 ODF2LQ9ULJ1 636 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 COL4A3BPQ9Y5P4 624 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 TRPV2Q9Y5S1 764 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 CDY2AQ9Y6F7 541 aa17.05■□□□□ 0.32
SEC13-201ENST00000337354 GOLGA6L22H0YM25 854 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 GPR32O75388 356 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 VTNP04004 478 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 GPC3P51654 580 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 CCL23P55773 120 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 NLRP11P59045 1033 aaKnown RBP17.04■□□□□ 0.32
SEC13-201ENST00000337354 UBE2HP62256 183 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 LAMTOR4Q0VGL1 99 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 TFDP1Q14186 410 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 DHX8Q14562 1220 aaKnown RBP17.04■□□□□ 0.32
SEC13-201ENST00000337354 ARSHQ5FYA8 562 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 MAEAQ7L5Y9 396 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 GPBP1Q86WP2 473 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 CEP57L1Q8IYX8 460 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 CCDC34Q96HJ3 373 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 RUSC1Q9BVN2 902 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 INO80BQ9C086 356 aaPredicted RBP17.04■□□□□ 0.32
SEC13-201ENST00000337354 WNT8AQ9H1J5 351 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 ADAMTS10Q9H324 1103 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 UMODL1Q5DID0 1318 aa17.04■□□□□ 0.32
SEC13-201ENST00000337354 PRPF40AO75400 957 aaKnown RBP17.03■□□□□ 0.32
SEC13-201ENST00000337354 KRT18P05783 430 aaKnown RBP17.03■□□□□ 0.32
SEC13-201ENST00000337354 PFKMP08237 780 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 CTSHP09668 335 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 TMEM62Q0P6H9 643 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 PPP2R5AQ15172 486 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 KIZQ2M2Z5 673 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 ODR4Q5SWX8 454 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 BADQ92934 168 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 IFT74Q96LB3 600 aa17.03■□□□□ 0.32
SEC13-201ENST00000337354 GCOM2Q9BZD3 368 aaPredicted RBP17.03■□□□□ 0.32
SEC13-201ENST00000337354 POLR3FQ9H1D9 316 aaPredicted RBP17.03■□□□□ 0.32
SEC13-201ENST00000337354 HIP1RO75146 1068 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 ZNF202O95125 648 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 MYL1P05976 194 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 GLRA2P23416 452 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 EIF4BP23588 611 aaKnown RBP17.02■□□□□ 0.32
SEC13-201ENST00000337354 FPGSQ05932 587 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 PPIGQ13427 754 aaKnown RBP eCLIP17.02■□□□□ 0.32
SEC13-201ENST00000337354 GIT2Q14161 759 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 LONRF3Q496Y0 759 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 KANK3Q6NY19 840 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 NLRP7Q8WX94 980 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 DDX12PQ92771 950 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 SCLYQ96I15 445 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 NTPCRQ9BSD7 190 aaKnown RBP17.02■□□□□ 0.32
SEC13-201ENST00000337354 NFKBIZQ9BYH8 718 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 GOLPH3LQ9H4A5 285 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 GPRC5CQ9NQ84 441 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 LARSQ9P2J5 1176 aaKnown RBP17.02■□□□□ 0.32
SEC13-201ENST00000337354 GINS2Q9Y248 185 aa17.02■□□□□ 0.32
SEC13-201ENST00000337354 TANC1Q9C0D5 1861 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 CXCL10P02778 98 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 SRGAP2CP0DJJ0 459 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 CSF2RAP15509 400 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 NAMPTP43490 491 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 FAM160A1Q05DH4 1040 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 PCBP1Q15365 356 aaKnown RBP eCLIP17.02■□□□□ 0.31
SEC13-201ENST00000337354 TPRNQ4KMQ1 711 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 FBXO47Q5MNV8 452 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 CNNM4Q6P4Q7 775 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 SRGAP1Q7Z6B7 1085 aa17.02■□□□□ 0.31
SEC13-201ENST00000337354 FMR1NBQ8N0W7 255 aaPredicted RBP17.02■□□□□ 0.31
SEC13-201ENST00000337354 DAW1Q8N136 415 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms