RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 FGD4Q96M96 766 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.11□□□□□ -0.31
FN1-202ENST00000336916 KPNA7A9QM74 516 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 NEMP1O14524 444 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 GAS2O43903 313 aaKnown RBP13.11□□□□□ -0.31
FN1-202ENST00000336916 CYP2C19P33261 490 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 ZHX2Q9Y6X8 837 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 TEX2Q8IWB9 1127 aa13.11□□□□□ -0.31
FN1-202ENST00000336916 ERCC3P19447 782 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 VPS41P49754 854 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 PTK2BQ14289 1009 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 XRRA1Q6P2D8 792 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 TUFT1Q9NNX1 390 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 APOEP02649 317 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 UBXN2AP68543 259 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 MAP3K10Q02779 954 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 RWDD4Q6NW29 188 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 YAF2Q8IY57 180 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 LTN1O94822 1766 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 POC1B-GALNT4F8VUJ3 575 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 KRT16P08779 473 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 CLNS1AP54105 237 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 TEDDM1Q5T9Z0 273 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 CMTR1Q8N1G2 835 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 GOLGA8IPA6NC78 632 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 GH2P01242 217 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 MX2P20592 715 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 BASP1P80723 227 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 CFAP61Q8NHU2 1237 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 BPIFA3Q9BQP9 254 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 AKAP12Q02952 1782 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 PYGBP11216 843 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 GDAP1Q8TB36 358 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 ANGPTL2Q9UKU9 493 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 STK25O00506 426 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 TRADDQ15628 312 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 TMEM106CQ9BVX2 250 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 EML4Q9HC35 981 aaKnown RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 PACSIN2Q9UNF0 486 aaPredicted RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 PPME1Q9Y570 386 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 MYO1DO94832 1006 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 GDF11O95390 407 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 PFKFB3Q16875 520 aaPredicted RBP13.1□□□□□ -0.31
FN1-202ENST00000336916 SNX19Q92543 992 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 CLIC4Q9Y696 253 aa13.1□□□□□ -0.31
FN1-202ENST00000336916 USP17L15C9J2P7 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L13C9JLJ4 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L11C9JVI0 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L18D6R9N7 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L22D6RA61 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L17D6RBQ6 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L19D6RCP7 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L20D6RJB6 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP17L24Q0WX57 530 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 SNX17Q15036 470 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 EMBQ6PCB8 327 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 USP13Q92995 863 aaPredicted RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 AAASQ9NRG9 546 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 RCOR1Q9UKL0 485 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 PPP1R9AQ9ULJ8 1098 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 LMTK2Q8IWU2 1503 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 CPDO75976 1380 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 MAPK13O15264 365 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 SNAPC2Q13487 334 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 IER5Q5VY09 327 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 STKLD1Q8NE28 680 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 OR6B3Q8NGW1 331 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 JPH1Q9HDC5 661 aaPredicted RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 ZRANB2O95218 330 aaKnown RBP eCLIP13.09□□□□□ -0.31
FN1-202ENST00000336916 CYBBP04839 570 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 RPS12P25398 132 aaKnown RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 CEP72Q9P209 647 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 KLHL8Q9P2G9 620 aaPredicted RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 ARL4CP56559 192 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 TCP11X2Q5H9J9 407 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 MEI1Q5TIA1 1274 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 TDRD7Q8NHU6 1098 aaKnown RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 IP6K2Q9UHH9 426 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 SNRNP48Q6IEG0 339 aaKnown RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 FAM95CA0A1B0GW59 222 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 HSD17B4P51659 736 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 PIGSQ96S52 555 aa13.09□□□□□ -0.31
FN1-202ENST00000336916 INO80Q9ULG1 1556 aaPredicted RBP13.09□□□□□ -0.31
FN1-202ENST00000336916 E5RI56 91 aa13.08□□□□□ -0.31
FN1-202ENST00000336916 STRIP1Q5VSL9 837 aa13.08□□□□□ -0.31
FN1-202ENST00000336916 NSUN7Q8NE18 718 aaKnown RBP13.08□□□□□ -0.31
FN1-202ENST00000336916 NDST4Q9H3R1 872 aa13.08□□□□□ -0.31
FN1-202ENST00000336916 LRRC7Q96NW7 1537 aa13.08□□□□□ -0.31
FN1-202ENST00000336916 GSPT1P15170 499 aaKnown RBP13.08□□□□□ -0.32
FN1-202ENST00000336916 CCT5P48643 541 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 DR1Q01658 176 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 OCRLQ01968 901 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 RESP18Q5W5W9 173 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 SPOPLQ6IQ16 392 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 TJP2Q9UDY2 1190 aa13.08□□□□□ -0.32
FN1-202ENST00000336916 ARHGEF28Q8N1W1 1705 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms