RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 LDLRAD1Q5T700 205 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 PCNX4Q63HM2 1172 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
HDAC6-201ENST00000334136 MSH4O15457 936 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 EXOC3O60645 756 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 TADA3O75528 432 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 ARP10275 920 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 ALDH5A1P51649 535 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 ZRSR2Q15696 482 aaKnown RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 MOXD1Q6UVY6 613 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SAPCD2Q86UD0 394 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SIAH1Q8IUQ4 282 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 C7orf31Q8N865 590 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SRGAP2O75044 1071 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 ARHGAP25P42331 645 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 CLNS1AP54105 237 aaKnown RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 LAMC2Q13753 1193 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 PGM5Q15124 567 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 KRT71Q3SY84 523 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 NUP58Q9BVL2 599 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SAMD15Q9P1V8 674 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SLC37A4O43826 429 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 PEX10O60683 326 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 EPB41P11171 864 aaKnown RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 GAP43P17677 238 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 ERCC5P28715 1186 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SLC9C1Q4G0N8 1177 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 GPR142Q7Z601 462 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 RPGRIP1Q96KN7 1286 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 GSDMAQ96QA5 445 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 IMPG2Q9BZV3 1241 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 KMT5AQ9NQR1 393 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 FBXO2Q9UK22 296 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.83□□□□□ -0.36
HDAC6-201ENST00000334136 RIPK3Q9Y572 518 aa12.83□□□□□ -0.36
HDAC6-201ENST00000334136 SLC15A5A6NIM6 579 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 TEX33O43247 280 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 FKTNO75072 461 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 CYP2C19P33261 490 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 LIG4P49917 911 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 PADI6Q6TGC4 694 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 ARMCX2Q7L311 632 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 MCPH1Q8NEM0 835 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 SHCBP1Q8NEM2 672 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 FBF1Q8TES7 1133 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 FUCA2Q9BTY2 467 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 ABHD16BQ9H3Z7 469 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 SMARCAD1Q9H4L7 1026 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 LAMB2P55268 1798 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 AOC2O75106 756 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 SLC7A5Q01650 507 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 TRIM58Q8NG06 486 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 ADPGKQ9BRR6 497 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 PARVGQ9HBI0 331 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 BTBD7Q9P203 1132 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 AKAP11Q9UKA4 1901 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 SRGAP2CP0DJJ0 459 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 GUCY2DQ02846 1103 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 KIAA1755Q5JYT7 1200 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 GSPT2Q8IYD1 628 aaKnown RBP12.82□□□□□ -0.36
HDAC6-201ENST00000334136 ZNF784Q8NCA9 323 aaPredicted RBP12.82□□□□□ -0.36
HDAC6-201ENST00000334136 NSRP1Q9H0G5 558 aaKnown RBP12.82□□□□□ -0.36
HDAC6-201ENST00000334136 ANKRD31Q8N7Z5 1873 aa12.82□□□□□ -0.36
HDAC6-201ENST00000334136 MEIS2O14770 477 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 CA12O43570 354 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 MYL1P05976 194 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 C2orf54Q08AI8 447 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 IFNL1Q8IU54 200 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 CYP2W1Q8TAV3 490 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 PPP1R16BQ96T49 567 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 RGPD3A6NKT7 1758 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 RGPD4Q7Z3J3 1758 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 A0A1B0GUA9 196 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 EIF3CLB5ME19 914 aaKnown RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 CETN2P41208 172 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 IFT88Q13099 833 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 SHC4Q6S5L8 630 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 HACE1Q8IYU2 909 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 RDH13Q8NBN7 331 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 RNF169Q8NCN4 708 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 NLRP7Q8WX94 980 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 NLRP4Q96MN2 994 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 MYCBPQ99417 103 aaPredicted RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 EIF3CQ99613 913 aaKnown RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 CCSER1Q9C0I3 900 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 TUFT1Q9NNX1 390 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 SFI1A8K8P3 1242 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 MAP2K5Q13163 448 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 BIRC3Q13489 604 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 CCDC6Q16204 474 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 XKR3Q5GH77 459 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 DAAM2Q86T65 1068 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 RASAL3Q86YV0 1011 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 LMBR1Q8WVP7 490 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 PAGE5Q96GU1 130 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 PURBQ96QR8 312 aaKnown RBP12.81□□□□□ -0.36
HDAC6-201ENST00000334136 PORCNQ9H237 461 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 POLD4Q9HCU8 107 aa12.81□□□□□ -0.36
HDAC6-201ENST00000334136 PRKAG2Q9UGJ0 569 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms