RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ICA1Q05084 483 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 PLS1Q14651 629 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 CBWD6Q4V339 395 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 CBWD3Q5JTY5 395 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 CBWD5Q5RIA9 395 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 SAMD1Q6SPF0 538 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 MYCT1Q8N699 235 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 SUPT20HQ8NEM7 779 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 ERMNQ8TAM6 284 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 ARHGEF26Q96DR7 871 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 AMNQ9BXJ7 453 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.4□□□□□ -0.262e-11■■■■■ 173.1
VPS33B-201ENST00000333371 SEPT11Q9NVA2 429 aaKnown RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 RGPD3A6NKT7 1758 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 RGPD4Q7Z3J3 1758 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 GCOM1H8Y6P7 765 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 NDUFB10O96000 172 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 MYZAPP0CAP1 466 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 SF3A3Q12874 501 aaKnown RBP eCLIP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 ARHGAP44Q17R89 818 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 RNF187Q5TA31 235 aaPredicted RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 FBXO11Q86XK2 927 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 SLC35G2Q8TBE7 412 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 NAP1L4Q99733 375 aaKnown RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 IDI2Q9BXS1 227 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 FAM198AQ9UFP1 575 aa13.4□□□□□ -0.26
VPS33B-201ENST00000333371 BZW2Q9Y6E2 419 aaKnown RBP13.4□□□□□ -0.26
VPS33B-201ENST00000333371 GOLGA6L10A6NI86 522 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 HMGB1P1B2RPK0 211 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-201ENST00000333371 IFT88Q13099 833 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 DRAP1Q14919 205 aaPredicted RBP13.39□□□□□ -0.27
VPS33B-201ENST00000333371 QPCTQ16769 361 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 Q4G0T1 1027 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 C10orf76Q5T2E6 689 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 SLFN11Q7Z7L1 901 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 FAM186BQ8IYM0 893 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 OTUD6BQ8N6M0 293 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 BANK1Q8NDB2 785 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 TDRD3Q9H7E2 651 aaKnown RBP13.39□□□□□ -0.27
VPS33B-201ENST00000333371 ERVK-5Q9HDB9 667 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 C10orf71Q711Q0 1435 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 C21orf2O43822 256 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 SREBF1P36956 1147 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 AP3B2Q13367 1082 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 CC2D2BQ6DHV5 1058 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 BORCS6Q96GS4 357 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 DYDC2Q96IM9 177 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 WDR18Q9BV38 432 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 DNAJC12Q9UKB3 198 aa13.39□□□□□ -0.27
VPS33B-201ENST00000333371 NOVA2Q9UNW9 492 aaKnown RBP13.39□□□□□ -0.27
VPS33B-201ENST00000333371 F8VZ95 297 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 MEFVO15553 781 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 HNRNPH1P31943 449 aaKnown RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 GTF2A1P52655 376 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 DHX9Q08211 1270 aaKnown RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 CUL1Q13616 776 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 RRP1BQ14684 758 aaKnown RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 IFI16Q16666 785 aaKnown RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 SPRED3Q2MJR0 410 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 ODF2Q5BJF6 829 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 UBAP2Q5T6F2 1119 aaKnown RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 DCAF4Q8WV16 495 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 GLG1Q92896 1179 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 HES6Q96HZ4 224 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 TMOD4Q9NZQ9 345 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 WRAP73Q9P2S5 460 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 TISP43B9A030 160 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 CES2O00748 559 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 KIAA0754O94854 1291 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 FAM13AO94988 1023 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 RPL13P26373 211 aaKnown RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 STAT1P42224 750 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 B4GALNT4Q76KP1 1039 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 MAEAQ7L5Y9 396 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 GPR88Q9GZN0 384 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 THAP2Q9H0W7 228 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 SUCLA2Q9P2R7 463 aaPredicted RBP13.38□□□□□ -0.27
VPS33B-201ENST00000333371 ATP8A1Q9Y2Q0 1164 aa13.38□□□□□ -0.27
VPS33B-201ENST00000333371 A0A1W2PRG0 241 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 BHMG1C9JSJ3 638 aaPredicted RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 SLITRK3O94933 977 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 EYA4O95677 639 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 SOX5P35711 763 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 BMT2Q1RMZ1 405 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 SYDE2Q5VT97 1194 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MMS22LQ6ZRQ5 1243 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 VPS36Q86VN1 386 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 RASGEF1CQ8N431 466 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 SLC30A5Q8TAD4 765 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MDM1Q8TC05 714 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 MKL1Q969V6 931 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 CALR3Q96L12 384 aaKnown RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 METTL14Q9HCE5 456 aaKnown RBP13.37□□□□□ -0.27
VPS33B-201ENST00000333371 NYAP2Q9P242 653 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 SLC12A6Q9UHW9 1150 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 AMFRQ9UKV5 643 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 COG5Q9UP83 839 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 CFBP00751 764 aa13.37□□□□□ -0.27
VPS33B-201ENST00000333371 FMO5P49326 533 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms