RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 CYBAP13498 195 aa25.66■■□□□ 1.7
TSEN54-201ENST00000333213 POLGP54098 1239 aaPredicted RBP25.66■■□□□ 1.7
TSEN54-201ENST00000333213 PEX3P56589 373 aa25.66■■□□□ 1.7
TSEN54-201ENST00000333213 TLK2Q86UE8 772 aa25.66■■□□□ 1.7
TSEN54-201ENST00000333213 MCPH1Q8NEM0 835 aa25.66■■□□□ 1.7
TSEN54-201ENST00000333213 XPO4Q9C0E2 1151 aaKnown RBP25.66■■□□□ 1.7
TSEN54-201ENST00000333213 A6NJR5 290 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 ZMYM2Q9UBW7 1377 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 EIF3DO15371 548 aaKnown RBP eCLIP25.65■■□□□ 1.7
TSEN54-201ENST00000333213 CDK11BP21127 795 aaKnown RBP25.65■■□□□ 1.7
TSEN54-201ENST00000333213 LRRC63Q05C16 580 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 KNOP1Q1ED39 458 aaKnown RBP25.65■■□□□ 1.7
TSEN54-201ENST00000333213 TMEM143Q96AN5 459 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 PRIMPOLQ96LW4 560 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 SRRDQ9UH36 339 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 FAM184BQ9ULE4 1060 aa25.65■■□□□ 1.7
TSEN54-201ENST00000333213 DNAH12Q6ZR08 3092 aa25.64■■□□□ 1.7
TSEN54-201ENST00000333213 CASP8AP2Q9UKL3 1982 aa25.64■■□□□ 1.7
TSEN54-201ENST00000333213 ELNP15502 786 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 DRP2Q13474 957 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 FOXR2Q6PJQ5 311 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 LRRC55Q6ZSA7 311 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 TRAPPC12Q8WVT3 735 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 KIFAP3Q92845 792 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 SPTLC3Q9NUV7 552 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 INTS13Q9NVM9 706 aa25.64■■□□□ 1.69
TSEN54-201ENST00000333213 MAFO75444 373 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-201ENST00000333213 SERPINC1P01008 464 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 NPTX2P47972 431 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 SLC7A3Q8WY07 619 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 ZBTB10Q96DT7 871 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 MRFAP1L1Q96HT8 127 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 KIFC3Q9BVG8 833 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 THAP9Q9H5L6 903 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 H3BRB1 525 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 K7ENM7 598 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 TGFB1I1O43294 461 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 KIF20AO95235 890 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 MAPTP10636 758 aaKnown RBP25.63■■□□□ 1.69
TSEN54-201ENST00000333213 NCKAP1LP55160 1127 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 CACNB2Q08289 660 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-201ENST00000333213 DGKDQ16760 1214 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 TCP11X2Q5H9J9 407 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 MFSD14CQ5VZR4 134 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 ZNF296Q8WUU4 475 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-201ENST00000333213 POLR3FQ9H1D9 316 aaPredicted RBP25.63■■□□□ 1.69
TSEN54-201ENST00000333213 TUT1Q9H6E5 874 aaKnown RBP25.63■■□□□ 1.69
TSEN54-201ENST00000333213 NRBP1Q9UHY1 535 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 TRPC6Q9Y210 931 aa25.63■■□□□ 1.69
TSEN54-201ENST00000333213 ADGRA3Q8IWK6 1321 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 SLC16A4O15374 487 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 HBP1O60381 514 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 AKR1A1P14550 325 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 RFC5P40937 340 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 UBASH3AP57075 661 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 MKRN4PQ13434 485 aaPredicted RBP25.62■■□□□ 1.69
TSEN54-201ENST00000333213 NTPCRQ9BSD7 190 aaKnown RBP25.62■■□□□ 1.69
TSEN54-201ENST00000333213 TRAF3IP3Q9Y228 551 aa25.62■■□□□ 1.69
TSEN54-201ENST00000333213 KCNJ18B7U540 433 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 ARL2P36404 184 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 RTP1P59025 263 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 KCNJ12Q14500 433 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 HAUS6Q7Z4H7 955 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 TMEM161BQ8NDZ6 487 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 ST6GALNAC4Q9H4F1 302 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 C17orf75Q9HAS0 396 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 SAGE1Q9NXZ1 904 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 IGKV6-21A0A0C4DH24 114 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 LRRC10BA6NIK2 292 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 GTF2BQ00403 316 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 TBC1D8BQ0IIM8 1120 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 KRT31Q15323 416 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 PTPN21Q16825 1174 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 ASAP3Q8TDY4 903 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 LIMA1Q9UHB6 759 aaKnown RBP25.61■■□□□ 1.69
TSEN54-201ENST00000333213 TSKSQ9UJT2 592 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 Q9Y3F1 56 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 PCDHB13Q9Y5F0 798 aa25.61■■□□□ 1.69
TSEN54-201ENST00000333213 INSRRP14616 1297 aa25.6■■□□□ 1.69
TSEN54-201ENST00000333213 GLRA2P23416 452 aa25.6■■□□□ 1.69
TSEN54-201ENST00000333213 DMP1Q13316 513 aaPredicted RBP25.6■■□□□ 1.69
TSEN54-201ENST00000333213 NOLC1Q14978 699 aaKnown RBP eCLIP25.6■■□□□ 1.69
TSEN54-201ENST00000333213 ZC3H3Q8IXZ2 948 aaKnown RBP25.6■■□□□ 1.69
TSEN54-201ENST00000333213 SPIRE2Q8WWL2 714 aa25.6■■□□□ 1.69
TSEN54-201ENST00000333213 PPME1Q9Y570 386 aa25.6■■□□□ 1.69
TSEN54-201ENST00000333213 CCDC169A6NNP5 214 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 GOLGA6L6A8MZA4 724 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 PDXKO00764 312 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 BEX3Q00994 111 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 NOC3LQ8WTT2 800 aaKnown RBP25.59■■□□□ 1.69
TSEN54-201ENST00000333213 KAT2BQ92831 832 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 TSG101Q99816 390 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 TYW1Q9NV66 732 aaKnown RBP25.59■■□□□ 1.69
TSEN54-201ENST00000333213 FKBP3Q00688 224 aaKnown RBP25.59■■□□□ 1.69
TSEN54-201ENST00000333213 CREBRFQ8IUR6 639 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 LRRC71Q8N4P6 559 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 SPC24Q8NBT2 197 aa25.59■■□□□ 1.69
TSEN54-201ENST00000333213 UBE4BO95155 1302 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 A0A1B0GTH6 734 aa25.58■■□□□ 1.69
TSEN54-201ENST00000333213 MYADML2A6NDP7 307 aa25.58■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms