RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 SEPT9Q9UHD8 586 aaPredicted RBP19.93■□□□□ 0.78
HDDC3-201ENST00000330334 WDR81Q562E7 1941 aa19.93■□□□□ 0.78
HDDC3-201ENST00000330334 MYO7AQ13402 2215 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 DDX11L8A8MPP1 907 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 EML1O00423 815 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 HOXA2O43364 376 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 ZSCAN20P17040 1043 aaPredicted RBP19.92■□□□□ 0.78
HDDC3-201ENST00000330334 MTERF2Q49AM1 385 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 PAN2Q504Q3 1202 aaKnown RBP19.92■□□□□ 0.78
HDDC3-201ENST00000330334 FAM102BQ5T8I3 360 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 ANO5Q75V66 913 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 SLFN12Q8IYM2 578 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 KLHL23Q8NBE8 558 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 ALG13Q9NP73 1137 aaKnown RBP19.92■□□□□ 0.78
HDDC3-201ENST00000330334 AAASQ9NRG9 546 aa19.92■□□□□ 0.78
HDDC3-201ENST00000330334 TCF20Q9UGU0 1960 aaKnown RBP19.92■□□□□ 0.78
HDDC3-201ENST00000330334 LARGE1O95461 756 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 SEC24BO95487 1268 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 ITGB1P05556 798 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 GATMP50440 423 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 UBE3AQ05086 875 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 EPHA7Q15375 998 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 CSPP1Q1MSJ5 1256 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 EARS2Q5JPH6 523 aaKnown RBP19.91■□□□□ 0.78
HDDC3-201ENST00000330334 ZNF410Q86VK4 478 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 GCOM2Q9BZD3 368 aaPredicted RBP19.91■□□□□ 0.78
HDDC3-201ENST00000330334 CHST12Q9NRB3 414 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 PCDHB12Q9Y5F1 795 aa19.91■□□□□ 0.78
HDDC3-201ENST00000330334 A0A0U1RQF3 1178 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 GRXCR2A6NFK2 248 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 TBKBP1A7MCY6 615 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 BAG4O95429 457 aaKnown RBP19.9■□□□□ 0.78
HDDC3-201ENST00000330334 EOMESO95936 686 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 NR5A1Q13285 461 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 DRP2Q13474 957 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 C4orf19Q8IY42 314 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 NLRP7Q8WX94 980 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 PPP2R3CQ969Q6 453 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 TRAIPQ9BWF2 469 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 INO80BQ9C086 356 aaPredicted RBP19.9■□□□□ 0.78
HDDC3-201ENST00000330334 TMEM117Q9H0C3 514 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 CYP26B1Q9NR63 512 aa19.9■□□□□ 0.78
HDDC3-201ENST00000330334 TMEM150BA6NC51 233 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 MARCH6O60337 910 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 LTBRP36941 435 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 SPIRE1Q08AE8 756 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 HYAL1Q12794 435 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 PTCRAQ6ISU1 281 aaPredicted RBP19.89■□□□□ 0.77
HDDC3-201ENST00000330334 ECHDC2Q86YB7 292 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 RSPH1Q8WYR4 309 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 SCLT1Q96NL6 688 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 TYW1Q9NV66 732 aaKnown RBP19.89■□□□□ 0.77
HDDC3-201ENST00000330334 DACT1Q9NYF0 836 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 SUCLA2Q9P2R7 463 aaPredicted RBP19.89■□□□□ 0.77
HDDC3-201ENST00000330334 FAM50BQ9Y247 325 aa19.89■□□□□ 0.77
HDDC3-201ENST00000330334 DTNBO60941 627 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 DNAJB1P25685 340 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 TRIM29Q14134 588 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 OTUD6AQ7L8S5 288 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 POTEDQ86YR6 584 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 FAM178BQ8IXR5 827 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 POF1BQ8WVV4 589 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 SLC7A3Q8WY07 619 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 CASD1Q96PB1 797 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 DHX33Q9H6R0 707 aaKnown RBP19.88■□□□□ 0.77
HDDC3-201ENST00000330334 CWH43Q9H720 699 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 ZSWIM4Q9H7M6 989 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 CLDND1Q9NY35 253 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 LIMCH1Q9UPQ0 1083 aa19.88■□□□□ 0.77
HDDC3-201ENST00000330334 BTBD18B2RXH4 712 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 JAK2O60674 1132 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 FGFR1P11362 822 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 LAG3P18627 525 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 SFPQP23246 707 aaKnown RBP eCLIP19.87■□□□□ 0.77
HDDC3-201ENST00000330334 RFC5P40937 340 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 PDE12Q6L8Q7 609 aaKnown RBP19.87■□□□□ 0.77
HDDC3-201ENST00000330334 ZNF598Q86UK7 904 aaKnown RBP19.87■□□□□ 0.77
HDDC3-201ENST00000330334 ZNF668Q96K58 619 aaPredicted RBP19.87■□□□□ 0.77
HDDC3-201ENST00000330334 CEP170P1Q96L14 293 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 SH2D3AQ9BRG2 576 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 LLPHQ9BRT6 129 aaKnown RBP19.87■□□□□ 0.77
HDDC3-201ENST00000330334 C1QTNF1Q9BXJ1 281 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 RNF19AQ9NV58 838 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 WRAP73Q9P2S5 460 aaPredicted RBP19.87■□□□□ 0.77
HDDC3-201ENST00000330334 PCDHA12Q9UN75 941 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 LZTS1Q9Y250 596 aa19.87■□□□□ 0.77
HDDC3-201ENST00000330334 A0A087WZ62 844 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 FAM205CA6NFA0 338 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 H3BQ06 376 aaPredicted RBP19.86■□□□□ 0.77
HDDC3-201ENST00000330334 GAS2O43903 313 aaKnown RBP19.86■□□□□ 0.77
HDDC3-201ENST00000330334 IBSPP21815 317 aaPredicted RBP19.86■□□□□ 0.77
HDDC3-201ENST00000330334 YWHABP31946 246 aaKnown RBP19.86■□□□□ 0.77
HDDC3-201ENST00000330334 ADAM15Q13444 863 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 SPOUT1Q5T280 376 aaKnown RBP19.86■□□□□ 0.77
HDDC3-201ENST00000330334 PLA2G4FQ68DD2 849 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 RHPN2Q8IUC4 686 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 DIS3L2Q8IYB7 885 aaKnown RBP19.86■□□□□ 0.77
HDDC3-201ENST00000330334 COLGALT1Q8NBJ5 622 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 HSD17B14Q9BPX1 270 aa19.86■□□□□ 0.77
HDDC3-201ENST00000330334 FDXACB1Q9BRP7 624 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms