RNA–Protein interactions for RNA: ENST00000329758.5

TRIM49-201, Transcript of tripartite motif containing 49, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM49, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-201ENST00000329758 TMEM87BQ96K49 555 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 ELAC2Q9BQ52 826 aaKnown RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 BHMT2Q9H2M3 363 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 GPCPD1Q9NPB8 672 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 TBC1D7Q9P0N9 293 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 SUCLA2Q9P2R7 463 aaPredicted RBP8.1□□□□□ -1.11
TRIM49-201ENST00000329758 CAPN6Q9Y6Q1 641 aa8.1□□□□□ -1.11
TRIM49-201ENST00000329758 PNPLA7Q6ZV29 1317 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 CACNA1SQ13698 1873 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 BHMG1C9JSJ3 638 aaPredicted RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 ATP9BO43861 1147 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 RAD21O60216 631 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 KRT38O76015 456 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 GNA14O95837 355 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 CHN1P15882 459 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 HOXD12P35452 270 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 PTDSS1P48651 473 aaKnown RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 PLOD1Q02809 727 aaPredicted RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 RCN2Q14257 317 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 KRT71Q3SY84 523 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 SLC44A4Q53GD3 710 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 EARS2Q5JPH6 523 aaKnown RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 RASIP1Q5U651 963 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 TPTE2Q6XPS3 522 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 SGMS1Q86VZ5 419 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 ZNF654Q8IZM8 581 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 ENAHQ8N8S7 591 aaPredicted RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 RETREG2Q8NC44 543 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 LSM14AQ8ND56 463 aaKnown RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 GATA6Q92908 595 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 GFM2Q969S9 779 aaKnown RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 ABHD8Q96I13 439 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 TMEM237Q96Q45 408 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 GSDMAQ96QA5 445 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 UBAC1Q9BSL1 405 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 TCHPQ9BT92 498 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 LRMDAQ9H2I8 198 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 VPS54Q9P1Q0 977 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 CROTQ9UKG9 612 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 INTUQ9ULD6 942 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 ZMYND8Q9ULU4 1186 aaPredicted RBP8.09□□□□□ -1.11
TRIM49-201ENST00000329758 STK24Q9Y6E0 443 aa8.09□□□□□ -1.11
TRIM49-201ENST00000329758 ESYT3A0FGR9 886 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 SIGLEC16A6NMB1 481 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ECE2O60344 883 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TRPC1P48995 793 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 SPA17Q15506 151 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TCP11X2Q5H9J9 407 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 SLC10A5Q5PT55 438 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TRAPPC3LQ5T215 181 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 CROCCP2Q86T23 111 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 EXOC8Q8IYI6 725 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 NME8Q8N427 588 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 KIF2BQ8N4N8 673 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 SLC44A5Q8NCS7 719 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 UCMAQ8WVF2 138 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 INPP5DQ92835 1189 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 DHTKD1Q96HY7 919 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TRAIPQ9BWF2 469 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 NRDE2Q9H7Z3 1164 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 DCLRE1BQ9H816 532 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 NHEJ1Q9H9Q4 299 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 NMRK1Q9NWW6 199 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 SAP30BPQ9UHR5 308 aaKnown RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 RWDD2AQ9UIY3 292 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TBC1D30Q9Y2I9 924 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TMEM247A6NEH6 219 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ZSCAN5CA6NGD5 496 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 LGALS16A8MUM7 142 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 KCNJ18B7U540 433 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 PPP1R3GB7ZBB8 358 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 RGL2O15211 777 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 POLR2DO15514 142 aaKnown RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ATP9AO75110 1047 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 UNC5CO95185 931 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 CPA3P15088 417 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 CD44P16070 742 aaKnown RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ECHS1P30084 290 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 LIFRP42702 1097 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ACADVLP49748 655 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TOB1P50616 345 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 STX17P56962 302 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 UBXN1Q04323 297 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 KCNJ12Q14500 433 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 HLTFQ14527 1009 aaKnown RBP eCLIP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 SEC23AQ15436 765 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 ADRM1Q16186 407 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 P3H1Q32P28 736 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 LIN52Q52LA3 116 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 FKBP15Q5T1M5 1219 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 DIS3L2Q8IYB7 885 aaKnown RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 GRAMD1CQ8IYS0 662 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 FANCBQ8NB91 859 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 OR2W6PQ8NHA6 318 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 HAUS1Q96CS2 278 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 NUDCD1Q96RS6 583 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 VPS16Q9H269 839 aa8.08□□□□□ -1.12
TRIM49-201ENST00000329758 DCP1AQ9NPI6 582 aaPredicted RBP8.08□□□□□ -1.12
TRIM49-201ENST00000329758 TAB2Q9NYJ8 693 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms