RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 SCN11AQ9UI33 1791 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 CYP26A1O43174 497 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 CTNNA1P35221 906 aaKnown RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 IREB2P48200 963 aaKnown RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 CBWD1Q9BRT8 395 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 ACAD9Q9H845 621 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 TBC1D22BQ9NU19 505 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 CAPN6Q9Y6Q1 641 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 BAZ2AQ9UIF9 1905 aaKnown RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 COPB2P35606 906 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 SLCO1A2P46721 670 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 PSMC5P62195 406 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 LACTBP83111 547 aaPredicted RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 IFRD2Q12894 506 aaPredicted RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 BRDTQ58F21 947 aaPredicted RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 MUM1L1Q5H9M0 696 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 MED15Q96RN5 788 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 OSBPL9Q96SU4 736 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 FAM204AQ9H8W3 233 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 CALCOCO1Q9P1Z2 691 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 MYO1FO00160 1098 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 WDR46O15213 610 aaKnown RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 FGRP09769 529 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 GBP2P32456 591 aaPredicted RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 MFAP3P55082 362 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 SYCE1Q8N0S2 351 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 POLR3FQ9H1D9 316 aaPredicted RBP17.35■□□□□ 0.37
SYNM-201ENST00000328642 ATP8A1Q9Y2Q0 1164 aa17.35■□□□□ 0.37
SYNM-201ENST00000328642 CCDC151A5D8V7 595 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 EIF3CLB5ME19 914 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 SMARCA1P28370 1054 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 YARSP54577 528 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 MAP3K9P80192 1104 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 EIF3CQ99613 913 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 LRRC1Q9BTT6 524 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 TEX13BQ9BXU2 312 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 MTRF1LQ9UGC7 380 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 NOD1Q9Y239 953 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 ZNF233A6NK53 670 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 KLRC4O43908 158 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 FTLP02792 175 aaPredicted RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 CENPPQ6IPU0 288 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 MOB2Q70IA6 237 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 RPUSD2Q8IZ73 545 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 C4orf32Q8N8J7 132 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 SYT2Q8N9I0 419 aaPredicted RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 IDI2Q9BXS1 227 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 INTS2Q9H0H0 1204 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 MKRN1Q9UHC7 482 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.34■□□□□ 0.37
SYNM-201ENST00000328642 PIK3R2O00459 728 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 TMEM62Q0P6H9 643 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 NT5DC1Q5TFE4 455 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 BSPRYQ5W0U4 402 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 TMEM270Q6UE05 265 aa17.34■□□□□ 0.37
SYNM-201ENST00000328642 GOLGB1Q14789 3259 aaKnown RBP17.34■□□□□ 0.37
SYNM-201ENST00000328642 NDUFAB1O14561 156 aa17.33■□□□□ 0.37
SYNM-201ENST00000328642 GGPS1O95749 300 aa17.33■□□□□ 0.37
SYNM-201ENST00000328642 EGFRP00533 1210 aa17.33■□□□□ 0.37
SYNM-201ENST00000328642 SREBF1P36956 1147 aa17.33■□□□□ 0.37
SYNM-201ENST00000328642 PPP4R3CPQ6ZMV5 832 aa17.33■□□□□ 0.37
SYNM-201ENST00000328642 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.37
SYNM-201ENST00000328642 ARHGAP20Q9P2F6 1191 aa17.33■□□□□ 0.37
SYNM-201ENST00000328642 EVI5O60447 810 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 MYZAPP0CAP1 466 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 LMNB1P20700 586 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 PPP2R5DQ14738 602 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 CPLX4Q7Z7G2 160 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 ZNF354CQ86Y25 554 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 IL31RAQ8NI17 732 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 SLC9A2Q9UBY0 812 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 MAPK4P31152 587 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 GABPAQ06546 454 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 IQCDQ96DY2 449 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 MTMR9Q96QG7 549 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 C11orf70Q9BRQ4 267 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 EHD4Q9H223 541 aa17.33■□□□□ 0.36
SYNM-201ENST00000328642 GOLGA6L7A0A1B0GV03 622 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 PDXKO00764 312 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 CLDN3O15551 220 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 KRT76Q01546 638 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 FAM118BQ9BPY3 351 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 ARFGEF2Q9Y6D5 1785 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 TUBBP07437 444 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 TKFCQ3LXA3 575 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 TRIM65Q6PJ69 517 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 NLRP7Q8WX94 980 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 ZNF302Q9NR11 478 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 HSPBP1Q9NZL4 362 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 BZW2Q9Y6E2 419 aaKnown RBP17.32■□□□□ 0.36
SYNM-201ENST00000328642 CA8P35219 290 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 JAG1P78504 1218 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 MTM1Q13496 603 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 INTS8Q75QN2 995 aaKnown RBP17.32■□□□□ 0.36
SYNM-201ENST00000328642 GMCL1Q96IK5 515 aa17.32■□□□□ 0.36
SYNM-201ENST00000328642 SPDYE2Q495Y8 402 aa17.31■□□□□ 0.36
SYNM-201ENST00000328642 CBWD2Q8IUF1 395 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms