RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 SRRDQ9UH36 339 aa14.07□□□□□ -0.16
DDX39A-202ENST00000324340 FAM184BQ9ULE4 1060 aa14.07□□□□□ -0.16
DDX39A-202ENST00000324340 NFE2L3Q9Y4A8 694 aa14.07□□□□□ -0.16
DDX39A-202ENST00000324340 MYH11P35749 1972 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 A6NJR5 290 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 MMP3P08254 477 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 PLS3P13797 630 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 RFC5P40937 340 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 PMS1P54277 932 aaKnown RBP14.06□□□□□ -0.16
DDX39A-202ENST00000324340 PLCB4Q15147 1175 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 CDKAL1Q5VV42 579 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 MFSD14CQ5VZR4 134 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 TRIM50Q86XT4 487 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 MYCT1Q8N699 235 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 TRPV1Q8NER1 839 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 OR6J1Q8NGC5 347 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 CD99L2Q8TCZ2 262 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 SCFD1Q8WVM8 642 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 C16orf70Q9BSU1 422 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 STRA6Q9BX79 667 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 SEMA6BQ9H3T3 888 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 ST6GALNAC4Q9H4F1 302 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 C17orf75Q9HAS0 396 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 ATP6V0A4Q9HBG4 840 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 XPNPEP1Q9NQW7 623 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 ERAP1Q9NZ08 941 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 TBC1D7Q9P0N9 293 aa14.06□□□□□ -0.16
DDX39A-202ENST00000324340 LARSQ9P2J5 1176 aaKnown RBP14.06□□□□□ -0.16
DDX39A-202ENST00000324340 SFI1A8K8P3 1242 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 ZBTB42B2RXF5 422 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 EIF3DO15371 548 aaKnown RBP eCLIP14.05□□□□□ -0.16
DDX39A-202ENST00000324340 PPP1R37O75864 691 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 AKR1A1P14550 325 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 CASP5P51878 434 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 STX17P56962 302 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 LRRC63Q05C16 580 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 LRRC41Q15345 812 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 DGKDQ16760 1214 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 MTERF2Q49AM1 385 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 ZCWPW2Q504Y3 356 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 ODR4Q5SWX8 454 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 ZNF720Q7Z2F6 126 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 TRMT1LQ7Z2T5 733 aaKnown RBP14.05□□□□□ -0.16
DDX39A-202ENST00000324340 TLK2Q86UE8 772 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 FAM178BQ8IXR5 827 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 C17orf53Q8N3J3 647 aaPredicted RBP14.05□□□□□ -0.16
DDX39A-202ENST00000324340 ZNF507Q8TCN5 953 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 KIFAP3Q92845 792 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 DUSP9Q99956 384 aaKnown RBP14.05□□□□□ -0.16
DDX39A-202ENST00000324340 MRPL44Q9H9J2 332 aaKnown RBP14.05□□□□□ -0.16
DDX39A-202ENST00000324340 POLD4Q9HCU8 107 aa14.05□□□□□ -0.16
DDX39A-202ENST00000324340 UBE4BO95155 1302 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 IGKV6-21A0A0C4DH24 114 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 TRIM49BA6NDI0 452 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 HBP1O60381 514 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 FKTNO75072 461 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 MAFO75444 373 aaPredicted RBP14.04□□□□□ -0.16
DDX39A-202ENST00000324340 NKX3-2P78367 333 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 ALCAMQ13740 583 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 EMC2Q15006 297 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 TEX35Q5T0J7 233 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 ANKRD40Q6AI12 368 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 EXOC8Q8IYI6 725 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 SLC17A8Q8NDX2 589 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 NOC3LQ8WTT2 800 aaKnown RBP14.04□□□□□ -0.16
DDX39A-202ENST00000324340 KCNN1Q92952 543 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 NTPCRQ9BSD7 190 aaKnown RBP14.04□□□□□ -0.16
DDX39A-202ENST00000324340 KCTD10Q9H3F6 313 aa14.04□□□□□ -0.16
DDX39A-202ENST00000324340 DYNC1LI2O43237 492 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 GAS2O43903 313 aaKnown RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 DUSP11O75319 330 aaKnown RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 MYBP10242 640 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 ATP1A3P13637 1013 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 MARK3P27448 753 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 NMT1P30419 496 aaKnown RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 HOXD13P35453 343 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 POLGP54098 1239 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 NCKAP1LP55160 1127 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 PRMT2P55345 433 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 MAP2K1Q02750 393 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 ARHGEF6Q15052 776 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 KNOP1Q1ED39 458 aaKnown RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 FAM102BQ5T8I3 360 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 MAP3K21Q5TCX8 1036 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 CEP135Q66GS9 1140 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 STXBP4Q6ZWJ1 553 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 TXLNBQ8N3L3 684 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 PXYLP1Q8TE99 480 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 SPIRE2Q8WWL2 714 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 SLC7A3Q8WY07 619 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 RNPEPQ9H4A4 650 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 THAP9Q9H5L6 903 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 GPRC5CQ9NQ84 441 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 SAMSN1Q9NSI8 373 aaKnown RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 KCNG1Q9UIX4 513 aa14.03□□□□□ -0.16
DDX39A-202ENST00000324340 ZNF215Q9UL58 517 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 V9GYY5 206 aaPredicted RBP14.03□□□□□ -0.16
DDX39A-202ENST00000324340 COL1A2P08123 1366 aa14.02□□□□□ -0.16
DDX39A-202ENST00000324340 H3BRB1 525 aa14.02□□□□□ -0.17
DDX39A-202ENST00000324340 SEPT4O43236 478 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms