RNA–Protein interactions for RNA: ENST00000322507.12

COL12A1-201, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL12A1, Length 11,723 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-201ENST00000322507 ATP8A1Q9Y2Q0 1164 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 SF3A3Q12874 501 aaKnown RBP eCLIP10.36□□□□□ -0.75
COL12A1-201ENST00000322507 POMGNT1Q8WZA1 660 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 MNTQ99583 582 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 LEMD3Q9Y2U8 911 aa10.36□□□□□ -0.75
COL12A1-201ENST00000322507 IQANK1A0A1B0GTG1 560 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SMAPO00193 183 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TLR3O15455 904 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TOMM70O94826 608 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 RPS8P62241 208 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SLC39A14Q15043 492 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ARL13BQ3SXY8 428 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 POLNQ7Z5Q5 900 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 IFNL3Q8IZI9 196 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 RSPH1Q8WYR4 309 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SLC8A2Q9UPR5 921 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM13O60858 407 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TTLL1O95922 423 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SP4Q02446 784 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 CASP14P31944 242 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 HIBCHQ6NVY1 386 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 FMO2Q99518 471 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 NFKBIL1Q9UBC1 381 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 IQGAP3Q86VI3 1631 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 MAP2P11137 1827 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 CPP00450 1065 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SOX6P35712 828 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TIMM10P62072 90 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ARMCX4Q5H9R4 360 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM62Q9BVG3 475 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 R3HDM2Q9Y2K5 976 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 PRDM15P57071 1507 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM49P0CI25 452 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TRIM49CP0CI26 452 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 CIITAP33076 1130 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 EIF2S3P41091 472 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 PNOCQ13519 176 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ME3Q16798 604 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 THAP9Q9H5L6 903 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SAP30BPQ9UHR5 308 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF215Q9UL58 517 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 KLRF2D3W0D1 207 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 UBAP1LF5GYI3 381 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 PER1O15534 1290 aaPredicted RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ECEL1O95672 775 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 CASP8Q14790 479 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SLFN12LQ6IEE8 588 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 MLXIPQ9HAP2 919 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 MAPK8IP1Q9UQF2 711 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 PLEKHG2Q9H7P9 1386 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ZC3H12BQ5HYM0 836 aaKnown RBP10.35□□□□□ -0.75
COL12A1-201ENST00000322507 SCYL1Q96KG9 808 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 TTLL3Q9Y4R7 772 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF212Q9UDV6 495 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 MAGI2Q86UL8 1455 aa10.35□□□□□ -0.75
COL12A1-201ENST00000322507 AFPP02771 609 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 KBTBD12Q3ZCT8 623 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 ZNF658Q5TYW1 1059 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 PRR23BQ6ZRT6 265 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 FAM192AQ9GZU8 254 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 TRPV6Q9H1D0 765 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 STMND1H3BQB6 276 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CNKSR1Q969H4 720 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 FAM227BQ96M60 508 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 DHX36Q9H2U1 1008 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 KAT6AQ92794 2004 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 PTGS2P35354 604 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 FAM102BQ5T8I3 360 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 ARMCX5Q6P1M9 558 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 MED10Q9BTT4 135 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 NCOA5Q9HCD5 579 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC59Q9P031 241 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CYP4A11Q02928 519 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 HP1BP3Q5SSJ5 553 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CYP4A22Q5TCH4 519 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 ARHGEF25Q86VW2 580 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC36Q8IYA8 594 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 VPS37AQ8NEZ2 397 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 ST7Q9NRC1 585 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 INTUQ9ULD6 942 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 PCCAP05165 728 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 EPS8Q12929 822 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 FBXO11Q86XK2 927 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 TSPYL6Q8N831 410 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 HDAC11Q96DB2 347 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 ZWILCHQ9H900 591 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 MIF4GDA9UHW6 222 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 HNRNPDLO14979 420 aaKnown RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 KCNA3P22001 575 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 CCDC85BQ15834 202 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 GRM1Q13255 1194 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 IQCB1Q15051 598 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 VPS39Q96JC1 886 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 FAM193BQ96PV7 902 aaPredicted RBP10.34□□□□□ -0.75
COL12A1-201ENST00000322507 XDHP47989 1333 aa10.34□□□□□ -0.75
COL12A1-201ENST00000322507 NUP107P57740 925 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms