RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 ARHGEF15O94989 841 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 DARSP14868 501 aaKnown RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 EMC2Q15006 297 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 ZNF410Q86VK4 478 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 CATSPER3Q86XQ3 398 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 HSCBQ8IWL3 235 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 TCP11Q8WWU5 503 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 PSPC1Q8WXF1 523 aaKnown RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 LINC01599Q8WXQ3 324 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 SNX21Q969T3 373 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 NLRP4Q96MN2 994 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 MTRQ99707 1265 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 POLR3CQ9BUI4 534 aaPredicted RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 LRWD1Q9UFC0 647 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 STK24Q9Y6E0 443 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 LINC01553A4QN01 128 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 MED24O75448 989 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 STAG3L1P0CL83 205 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 SPATA31C1P0DKV0 1188 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 XRCC6P12956 609 aaKnown RBP eCLIP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 IBSPP21815 317 aaPredicted RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 RPA1P27694 616 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 PRPHP41219 470 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 DTHD1Q6ZMT9 781 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 RTN4RL1Q86UN2 441 aaPredicted RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 NPAS4Q8IUM7 802 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 PIGOQ8TEQ8 1089 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 TMEM143Q96AN5 459 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 NACC1Q96RE7 527 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 TGS1Q96RS0 853 aaKnown RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 ADAM2Q99965 735 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 INO80BQ9C086 356 aaPredicted RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 C1orf112Q9NSG2 853 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 FOXD4L1Q9NU39 408 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 RNF216Q9NWF9 866 aaPredicted RBP16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 LRFN2Q9ULH4 789 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 COL4A3BPQ9Y5P4 624 aa16.35■□□□□ 0.21
TUBA3D-201ENST00000321253 ARID2Q68CP9 1835 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 TTC3P53804 2025 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 A0A087WZ62 844 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 DGAT1O75907 488 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 ZSCAN20P17040 1043 aaPredicted RBP16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 IGFBP4P22692 258 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 CCT6AP40227 531 aaKnown RBP16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 RARRES1P49788 294 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 PDIA5Q14554 519 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 KSR1Q8IVT5 923 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 MAFAQ8NHW3 353 aaPredicted RBP16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 SP7Q8TDD2 431 aaPredicted RBP16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 FDXACB1Q9BRP7 624 aaPredicted RBP16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 ATP6V0A4Q9HBG4 840 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 RGS18Q9NS28 235 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 MTUS1Q9ULD2 1270 aa16.34■□□□□ 0.21
TUBA3D-201ENST00000321253 MGEA5O60502 916 aa16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 SFPQP23246 707 aaKnown RBP eCLIP16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 SARSP49591 514 aaKnown RBP16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 POTEGQ6S5H5 508 aa16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 SLC24A5Q71RS6 500 aa16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 FERMT3Q86UX7 667 aa16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 IGSF22Q8N9C0 903 aa16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 PRPF31Q8WWY3 499 aaKnown RBP16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 PCDHB7Q9Y5E2 793 aa16.33■□□□□ 0.2
TUBA3D-201ENST00000321253 ADGRA3Q8IWK6 1321 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 A0A087WWV3 80 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 ASAP2O43150 1006 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 HSP90AA1P07900 732 aaKnown RBP16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 SRGAP2CP0DJJ0 459 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 SYT1P21579 422 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 MUTP22033 750 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 ERVK-21P61565 698 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 ATP2C1P98194 919 aaPredicted RBP16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 LAMTOR4Q0VGL1 99 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 KRT79Q5XKE5 535 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 FIBCD1Q8N539 461 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 SNX29Q8TEQ0 813 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 DBR1Q9UK59 544 aaKnown RBP16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 COL4A6Q14031 1691 aa16.32■□□□□ 0.2
TUBA3D-201ENST00000321253 ARHGEF35A5YM69 484 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 RFXAPO00287 272 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 USO1O60763 962 aaKnown RBP16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 CSDE1O75534 798 aaKnown RBP16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 DGKIO75912 1065 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 FGFR4P22455 802 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 BTG3Q14201 252 aaPredicted RBP16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 ADGRE1Q14246 886 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 MXD4Q14582 209 aaPredicted RBP16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 SAMD11Q96NU1 681 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 XPNPEP1Q9NQW7 623 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
TUBA3D-201ENST00000321253 COL6A3P12111 3177 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 EPOPA6NHQ4 379 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 C9IYK1 514 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 GTPBP6O43824 516 aaPredicted RBP16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 BMP15O95972 392 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 TFDP1Q14186 410 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 DSC3Q14574 896 aa16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 ARL6IP4Q66PJ3 421 aaKnown RBP16.3■□□□□ 0.2
TUBA3D-201ENST00000321253 CATSPER4Q7RTX7 472 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms