RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 ARHGAP42A6NI28 874 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 EN1Q05925 392 aaPredicted RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 HADHQ16836 314 aaKnown RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 CCDC93Q567U6 631 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 CIAPIN1Q6FI81 312 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 CCDC62Q6P9F0 684 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 CCDC197Q8NCU1 140 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 RNF146Q9NTX7 359 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 TYW1Q9NV66 732 aaKnown RBP17.75■□□□□ 0.43
CLIP4-201ENST00000320081 POLLQ9UGP5 575 aa17.75■□□□□ 0.43
CLIP4-201ENST00000320081 A0A087X0T9 212 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 TCRBV5S4A2TA0A5A2 114 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 WNT7AO00755 349 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 FAM228BP0C875 321 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 CA4P22748 312 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 SEC24CP53992 1094 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 PPFIBP2Q8ND30 876 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 CCNYQ8ND76 341 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 CYP2W1Q8TAV3 490 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 SREK1Q8WXA9 508 aaKnown RBP17.74■□□□□ 0.43
CLIP4-201ENST00000320081 PBKQ96KB5 322 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ZNF512BQ96KM6 892 aaPredicted RBP17.74■□□□□ 0.43
CLIP4-201ENST00000320081 NUDT12Q9BQG2 462 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 PACSIN1Q9BY11 444 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 HESX1Q9UBX0 185 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 INTUQ9ULD6 942 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 SPATA31A1Q5TZJ5 1347 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ZNF233A6NK53 670 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 A6NNZ2 444 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ZNF18P17022 549 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ACOT2P49753 483 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 TUBB8Q3ZCM7 444 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 CEP55Q53EZ4 464 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ACER1Q8TDN7 264 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 TMEM39BQ9GZU3 492 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 NRBP2Q9NSY0 501 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ANO9A1A5B4 782 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 FGFR4P22455 802 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 PLA2G4AP47712 749 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 CASP4P49662 377 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 GALCP54803 685 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 KCTD2Q14681 263 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 MCTP2Q6DN12 878 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 PPP1R18Q6NYC8 613 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 HAUS6Q7Z4H7 955 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 ZNF526Q8TF50 670 aaPredicted RBP17.74■□□□□ 0.43
CLIP4-201ENST00000320081 SPIRE2Q8WWL2 714 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 KLHL29Q96CT2 875 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
CLIP4-201ENST00000320081 EXOC1LA0A1B0GW35 172 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 LRRC8CQ8TDW0 803 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.73■□□□□ 0.43
CLIP4-201ENST00000320081 MAP2K2P36507 400 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 PPM1FP49593 454 aaPredicted RBP17.73■□□□□ 0.43
CLIP4-201ENST00000320081 VAMP7P51809 220 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 ACTN3Q08043 901 aaPredicted RBP17.73■□□□□ 0.43
CLIP4-201ENST00000320081 TAF12Q16514 161 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 SBK1Q52WX2 424 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 OR6B2Q6IFH4 312 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 SCYL3Q8IZE3 742 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 ADPGKQ9BRR6 497 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 MED10Q9BTT4 135 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 I3L4J1 428 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 HMGCS2P54868 508 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 BEND6Q5SZJ8 279 aaPredicted RBP17.73■□□□□ 0.43
CLIP4-201ENST00000320081 PROM2Q8N271 834 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 PI4K2AQ9BTU6 479 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 INTS2Q9H0H0 1204 aaKnown RBP17.73■□□□□ 0.43
CLIP4-201ENST00000320081 EFCC1Q9HA90 598 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 FRMPD1Q5SYB0 1578 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 DIP2BQ9P265 1576 aa17.73■□□□□ 0.43
CLIP4-201ENST00000320081 ZSCAN5CA6NGD5 496 aaPredicted RBP17.72■□□□□ 0.43
CLIP4-201ENST00000320081 EVI5O60447 810 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 RWDD2BP57060 319 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 HSPH1Q92598 858 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 FAM20AQ96MK3 541 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 IL17RBQ9NRM6 502 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 CALRP27797 417 aaKnown RBP17.72■□□□□ 0.43
CLIP4-201ENST00000320081 NAALADL2Q58DX5 795 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 GLIS3Q8NEA6 775 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 NUP85Q9BW27 656 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 MMEP08473 750 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 MAP7D1Q3KQU3 841 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 INPP5FQ9Y2H2 1132 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 H0Y3Z8 333 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 QARSP47897 775 aaKnown RBP17.72■□□□□ 0.43
CLIP4-201ENST00000320081 SEZ6Q53EL9 994 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 SLC27A3Q5K4L6 730 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 C16orf86Q6ZW13 317 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 WHAMMQ8TF30 809 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 DCAF4Q8WV16 495 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 ALG13Q9NP73 1137 aaKnown RBP17.72■□□□□ 0.43
CLIP4-201ENST00000320081 GINM1Q9NU53 330 aa17.72■□□□□ 0.43
CLIP4-201ENST00000320081 PPP2R5AQ15172 486 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 PPP2R5EQ16537 467 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 MAIP1Q8WWC4 291 aa17.71■□□□□ 0.43
CLIP4-201ENST00000320081 RNPC3Q96LT9 517 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms