RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 IGF2BP3O00425 579 aaKnown RBP eCLIP10.44□□□□□ -0.74
RPGR-201ENST00000318842 ANP32DO95626 131 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 TNFRSF8P28908 595 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 MPP2Q14168 576 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 MESDQ14696 234 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 ZFPM1Q8IX07 1006 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 RMDN2Q96LZ7 410 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 AK8Q96MA6 479 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 ZNF570Q96NI8 536 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 TRIM7Q9C029 511 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 SIX2Q9NPC8 291 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 SH3GLB2Q9NR46 395 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.44□□□□□ -0.74
RPGR-201ENST00000318842 SUGT1Q9Y2Z0 365 aa10.44□□□□□ -0.74
RPGR-201ENST00000318842 CCT8L1PA6NM43 557 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 GJC1P36383 396 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 DLG4P78352 724 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 PPP4R3AQ6IN85 833 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 CATSPER3Q86XQ3 398 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 EGFL6Q8IUX8 553 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 KIAA0825Q8IV33 1275 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 MREGQ8N565 214 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 CCDC63Q8NA47 563 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 DYDC1Q8WWB3 177 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 C12orf65Q9H3J6 166 aaKnown RBP10.43□□□□□ -0.74
RPGR-201ENST00000318842 KIF9Q9HAQ2 790 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 DDX4Q9NQI0 724 aaKnown RBP10.43□□□□□ -0.74
RPGR-201ENST00000318842 RNF14Q9UBS8 474 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 UTP11Q9Y3A2 253 aaKnown RBP10.43□□□□□ -0.74
RPGR-201ENST00000318842 RPTORQ8N122 1335 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 TMEM150BA6NC51 233 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 DDX39AO00148 427 aaKnown RBP10.43□□□□□ -0.74
RPGR-201ENST00000318842 H2AFZP0C0S5 128 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 ZDHHC24Q6UX98 284 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 H2AFVQ71UI9 128 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 CEP120Q8N960 986 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 MICAL1Q8TDZ2 1067 aa10.43□□□□□ -0.74
RPGR-201ENST00000318842 ATXN2LQ8WWM7 1075 aaKnown RBP10.43□□□□□ -0.74
RPGR-201ENST00000318842 INTS9Q9NV88 658 aaKnown RBP10.43□□□□□ -0.74
RPGR-201ENST00000318842 STRCP1A6NGW2 1772 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 CCDC189A1A4V9 331 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 CETN3O15182 167 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 RGS16O15492 202 aaPredicted RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 DLATP10515 647 aaKnown RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 XRCC5P13010 732 aaKnown RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 CHKAP35790 457 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PSMC4P43686 418 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PMS2P54278 862 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 DDR1Q08345 913 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 DRAP1Q14919 205 aaPredicted RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 TMEM119Q4V9L6 283 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 JAMLQ86YT9 394 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 CD302Q8IX05 232 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 DAGLBQ8NCG7 672 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 CCDC197Q8NCU1 140 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 SPDL1Q96EA4 605 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 ZNF317Q96PQ6 595 aaPredicted RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 YIPF3Q9GZM5 350 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 ITGB4P16144 1822 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 ERMARDQ5T6L9 678 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PPP1R18Q6NYC8 613 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 CYP4X1Q8N118 509 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 SLC30A5Q8TAD4 765 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 OLIG1Q8TAK6 271 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 LRRC45Q96CN5 670 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 FAM129AQ9BZQ8 928 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 USP20Q9Y2K6 914 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 SMCHD1A6NHR9 2005 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PAPPAQ13219 1627 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PVALEFA0A1B0GWK0 134 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 O00370 1275 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 EML1O00423 815 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PPIP5K2O43314 1243 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PDHA1P08559 390 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 EZRP15311 586 aaKnown RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 IKQ13123 557 aaPredicted RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 SBK1Q52WX2 424 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 NUGGCQ68CJ6 796 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 BARGINQ6ZT62 677 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 HOOK2Q96ED9 719 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 RTFDC1Q9BY42 306 aaPredicted RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 ECT2Q9H8V3 914 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 PSTPIP2Q9H939 334 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 AIPL1Q9NZN9 384 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 NKX1-2Q9UD57 310 aaPredicted RBP10.42□□□□□ -0.74
RPGR-201ENST00000318842 CCDC88AQ3V6T2 1871 aa10.42□□□□□ -0.74
RPGR-201ENST00000318842 LRP5O75197 1615 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 DNAH12Q6ZR08 3092 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 GNPATO15228 680 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 DDX3YO15523 660 aaKnown RBP10.41□□□□□ -0.74
RPGR-201ENST00000318842 AFPP02771 609 aaKnown RBP10.41□□□□□ -0.74
RPGR-201ENST00000318842 NR3C1P04150 777 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 CETPP11597 493 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 SESN3P58005 492 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 PARP10Q53GL7 1025 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 MFSD14BQ5SR56 506 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 ARMC3Q5W041 872 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 DENND2CQ68D51 928 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 RFX8Q6ZV50 586 aa10.41□□□□□ -0.74
RPGR-201ENST00000318842 SLC35C1Q96A29 364 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms