RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 FMNL3Q8IVF7 1028 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 FAM114A1Q8IWE2 563 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 CDC23Q9UJX2 597 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 TESPA1A2RU30 521 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-201ENST00000317677 CNMDO75829 334 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 GJA5P36382 358 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 MTIF2P46199 727 aaKnown RBP14.29□□□□□ -0.12
CPNE1-201ENST00000317677 LIG3P49916 1009 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 MAPK7Q13164 816 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 CRYMQ14894 314 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 PREPLQ4J6C6 727 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-201ENST00000317677 WDR93Q6P2C0 686 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 TOGARAM2Q6ZUX3 1019 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 PPFIBP1Q86W92 1011 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 ANKRD13AQ8IZ07 590 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 INPP4AQ96PE3 977 aaPredicted RBP14.29□□□□□ -0.12
CPNE1-201ENST00000317677 NACC1Q96RE7 527 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 PNKPQ96T60 521 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 TTYH3Q9C0H2 523 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 IKZF4Q9H2S9 585 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 KCNH4Q9UQ05 1017 aa14.29□□□□□ -0.12
CPNE1-201ENST00000317677 ANKRD33BA6NCL7 494 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 CCND2P30279 289 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 DNM2P50570 870 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 KCNA1Q09470 495 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 PPP2R5AQ15172 486 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 RGMBQ6NW40 437 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 RAD9BQ6WBX8 426 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 SPATS2Q86XZ4 545 aaKnown RBP14.28□□□□□ -0.12
CPNE1-201ENST00000317677 DAW1Q8N136 415 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 PROCA1Q8NCQ7 364 aaPredicted RBP14.28□□□□□ -0.12
CPNE1-201ENST00000317677 NEK9Q8TD19 979 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 CCDC102AQ96A19 550 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 NOC4LQ9BVI4 516 aaKnown RBP14.28□□□□□ -0.12
CPNE1-201ENST00000317677 TBC1D22BQ9NU19 505 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 ARID2Q68CP9 1835 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 ZMYM2Q9UBW7 1377 aa14.28□□□□□ -0.12
CPNE1-201ENST00000317677 TTC26A0AVF1 554 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 TMEM150BA6NC51 233 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 SOWAHDA6NJG2 315 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 RNF40O75150 1001 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 FSBPO95073 299 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 SYF2O95926 243 aaKnown RBP14.27□□□□□ -0.12
CPNE1-201ENST00000317677 P4HBP07237 508 aaKnown RBP14.27□□□□□ -0.12
CPNE1-201ENST00000317677 KCNA2P16389 499 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 FNTAP49354 379 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 ZNF131P52739 623 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 CNTN2Q02246 1040 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 NOGQ13253 232 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 BMT2Q1RMZ1 405 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 WLSQ5T9L3 541 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 XRRA1Q6P2D8 792 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 NSUN6Q8TEA1 469 aaKnown RBP14.27□□□□□ -0.12
CPNE1-201ENST00000317677 TSG101Q99816 390 aa14.27□□□□□ -0.12
CPNE1-201ENST00000317677 A6NNZ2 444 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 PES1O00541 588 aaKnown RBP14.27□□□□□ -0.13
CPNE1-201ENST00000317677 CXCL11O14625 94 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 NMT1P30419 496 aaKnown RBP14.27□□□□□ -0.13
CPNE1-201ENST00000317677 ERVK-24P63145 666 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 PPIL2Q13356 520 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 TUBB8Q3ZCM7 444 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 VWA3BQ502W6 1294 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 FBXW10Q5XX13 1052 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 RIOX2Q8IUF8 465 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 GPRASP2Q96D09 838 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.13
CPNE1-201ENST00000317677 OLFML3Q9NRN5 406 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 ABHD10Q9NUJ1 306 aa14.27□□□□□ -0.13
CPNE1-201ENST00000317677 AOC2O75106 756 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 TBCAO75347 108 aaKnown RBP14.26□□□□□ -0.13
CPNE1-201ENST00000317677 LYPLA2O95372 231 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 SCP2P22307 547 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 ZNF157P51786 506 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-201ENST00000317677 FKBP3Q00688 224 aaKnown RBP14.26□□□□□ -0.13
CPNE1-201ENST00000317677 TBC1D8BQ0IIM8 1120 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 TTLL12Q14166 644 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-201ENST00000317677 MAN2A1Q16706 1144 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 COL13A1Q5TAT6 717 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-201ENST00000317677 CNGA4Q8IV77 575 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 CHST13Q8NET6 341 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 OPTNQ96CV9 577 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 ERGIC2Q96RQ1 377 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 JPH2Q9BR39 696 aaPredicted RBP14.26□□□□□ -0.13
CPNE1-201ENST00000317677 SH2D3AQ9BRG2 576 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 DESI2Q9BSY9 194 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 NDST4Q9H3R1 872 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 ZSWIM4Q9H7M6 989 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 SIK3Q9Y2K2 1263 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 COL4A3BPQ9Y5P4 624 aa14.26□□□□□ -0.13
CPNE1-201ENST00000317677 FAM13AO94988 1023 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 GAP43P17677 238 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 QARSP47897 775 aaKnown RBP14.25□□□□□ -0.13
CPNE1-201ENST00000317677 RARRES1P49788 294 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 TRIM14Q14142 442 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 KNOP1Q1ED39 458 aaKnown RBP14.25□□□□□ -0.13
CPNE1-201ENST00000317677 LDLRAD1Q5T700 205 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 GPAT2Q6NUI2 795 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 KSR1Q8IVT5 923 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 CCDC155Q8N6L0 562 aa14.25□□□□□ -0.13
CPNE1-201ENST00000317677 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms