RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 ME3Q16798 604 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 PAN2Q504Q3 1202 aaKnown RBP17.5■□□□□ 0.39
FOXR1-201ENST00000317011 ANO5Q75V66 913 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 NEK8Q86SG6 692 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 TNFRSF25Q93038 417 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 CASD1Q96PB1 797 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 ATP6V0A4Q9HBG4 840 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 TYW1Q9NV66 732 aaKnown RBP17.5■□□□□ 0.39
FOXR1-201ENST00000317011 NLRC5Q86WI3 1866 aa17.5■□□□□ 0.39
FOXR1-201ENST00000317011 A0A0U1RQF3 1178 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 TBKBP1A7MCY6 615 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 XBP1P17861 261 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.39
FOXR1-201ENST00000317011 IRS1P35568 1242 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 PSMC5P62195 406 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 UBE3AQ05086 875 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 LETM2Q2VYF4 491 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
FOXR1-201ENST00000317011 LRRC55Q6ZSA7 311 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 ZNF598Q86UK7 904 aaKnown RBP17.49■□□□□ 0.39
FOXR1-201ENST00000317011 GJD3Q8N144 294 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 POF1BQ8WVV4 589 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 TRAIPQ9BWF2 469 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 CLDND1Q9NY35 253 aa17.49■□□□□ 0.39
FOXR1-201ENST00000317011 ORC3Q9UBD5 711 aaPredicted RBP17.49■□□□□ 0.39
FOXR1-201ENST00000317011 CCDC194A0A1B0GVG4 234 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 TMEM150BA6NC51 233 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 C19orf67A6NJJ6 358 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 EOMESO95936 686 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
FOXR1-201ENST00000317011 ZSCAN20P17040 1043 aaPredicted RBP17.48■□□□□ 0.39
FOXR1-201ENST00000317011 COL9A1P20849 921 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 ECHDC2Q86YB7 292 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 TMEM117Q9H0C3 514 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 CHST12Q9NRB3 414 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 AAASQ9NRG9 546 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 PRKAG3Q9UGI9 489 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 PCDHB12Q9Y5F1 795 aa17.48■□□□□ 0.39
FOXR1-201ENST00000317011 DDX11L8A8MPP1 907 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 GPR37L1O60883 481 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 DTNBO60941 627 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 EYA4O95677 639 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 FGFR1P11362 822 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 QARSP47897 775 aaKnown RBP17.47■□□□□ 0.39
FOXR1-201ENST00000317011 PLCB3Q01970 1234 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 SPIRE1Q08AE8 756 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 EPHA7Q15375 998 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 MTERF2Q49AM1 385 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 PIK3AP1Q6ZUJ8 805 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 EFHBQ8N7U6 833 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 WASF1Q92558 559 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 GTF3C6Q969F1 213 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 MSLNLQ96KJ4 702 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 NAP1L4Q99733 375 aaKnown RBP17.47■□□□□ 0.39
FOXR1-201ENST00000317011 WRAP73Q9P2S5 460 aaPredicted RBP17.47■□□□□ 0.39
FOXR1-201ENST00000317011 LZTS1Q9Y250 596 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 PPME1Q9Y570 386 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 WDR81Q562E7 1941 aa17.47■□□□□ 0.39
FOXR1-201ENST00000317011 FSCN2O14926 492 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 HOXA2O43364 376 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 FGF18O76093 207 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 LARGE1O95461 756 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 DNM2P50570 870 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 SMAD2Q15796 467 aaKnown RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 ADGRD2Q7Z7M1 963 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 ZNF410Q86VK4 478 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 C4orf19Q8IY42 314 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 NECAB1Q8N987 351 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 COLGALT1Q8NBJ5 622 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 ZNF668Q96K58 619 aaPredicted RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 SH2D3AQ9BRG2 576 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 GCOM2Q9BZD3 368 aaPredicted RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 DHX33Q9H6R0 707 aaKnown RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 C11orf16Q9NQ32 467 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 CYP26B1Q9NR63 512 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 CLEC1BQ9P126 229 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 SUCLA2Q9P2R7 463 aaPredicted RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 HCSTQ9UBK5 93 aa17.46■□□□□ 0.39
FOXR1-201ENST00000317011 SEPT9Q9UHD8 586 aaPredicted RBP17.46■□□□□ 0.39
FOXR1-201ENST00000317011 LINC01565O15544 149 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 MBTPS2O43462 519 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 CCNT1O60563 726 aaKnown RBP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 DKC1O60832 514 aaKnown RBP eCLIP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 EIF5BO60841 1220 aaKnown RBP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 TBX10O75333 385 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 SEC24BO95487 1268 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 ATF7P17544 494 aaPredicted RBP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 FGFR4P22455 802 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 ERVFC1P60507 584 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 ZP2Q05996 745 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 PDE12Q6L8Q7 609 aaKnown RBP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 ZNF579Q8NAF0 562 aaKnown RBP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 JPH2Q9BR39 696 aaPredicted RBP17.45■□□□□ 0.38
FOXR1-201ENST00000317011 LRFN3Q9BTN0 628 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 IGFLR1Q9H665 355 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 IFT122Q9HBG6 1241 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 FAM50BQ9Y247 325 aa17.45■□□□□ 0.38
FOXR1-201ENST00000317011 FNDC1Q4ZHG4 1894 aaPredicted RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms