RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CCDC34Q96HJ3 373 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 PUF60Q9UHX1 559 aaKnown RBP8.61□□□□□ -1.03
CNOT4-201ENST00000315544 IGKV6D-21A0A0A0MT36 114 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 SIGLEC16A6NMB1 481 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 ANKRD63C9JTQ0 380 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 MEIS1O00470 390 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 UNGP13051 313 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-201ENST00000315544 GUCY2CP25092 1073 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 PTENP60484 403 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 CTC1Q2NKJ3 1217 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 CPNE8Q86YQ8 564 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 TXLNBQ8N3L3 684 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 TRIM58Q8NG06 486 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 HELQQ8TDG4 1101 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 COA7Q96BR5 231 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 PRMT6Q96LA8 375 aaPredicted RBP8.61□□□□□ -1.03
CNOT4-201ENST00000315544 MAPK8IP1Q9UQF2 711 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 TELO2Q9Y4R8 837 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 AFG3L2Q9Y4W6 797 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 COL4A3BPQ9Y5P4 624 aa8.61□□□□□ -1.03
CNOT4-201ENST00000315544 SLC9A1P19634 815 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 MAGEA9P43362 315 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ZNF252P-AS1Q0IIN9 211 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 SART3Q15020 963 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 RINT1Q6NUQ1 792 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ZNF720Q7Z2F6 126 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 METTL13Q8N6R0 699 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ARHGEF26Q96DR7 871 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 RNPC3Q96LT9 517 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 RRP15Q9Y3B9 282 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 SPTBN5Q9NRC6 3674 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 MINDY4BA8MYZ0 360 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 KIAA0391O15091 583 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 MGRN1O60291 552 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ACO1P21399 889 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 DRD4P21917 467 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 GNAQP50148 359 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 NBPF9Q3BBW0 867 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ZC3H12AQ5D1E8 599 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 IQCEQ6IPM2 695 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 BANK1Q8NDB2 785 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 DENND1AQ8TEH3 1009 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 DCAF4Q8WV16 495 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 DBNDD1Q9H9R9 158 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 MCM9Q9NXL9 1143 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 PPP1R9AQ9ULJ8 1098 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 ITGA4P13612 1032 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 TAL1P17542 331 aaPredicted RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 STAT6P42226 847 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 NAP1L1P55209 391 aaKnown RBP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 IRF5Q13568 498 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 MPP2Q14168 576 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 DPY19L2Q6NUT2 758 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 AGGF1Q8N302 714 aaeCLIP8.6□□□□□ -1.03
CNOT4-201ENST00000315544 CSGALNACT2Q8N6G5 542 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 MKNK1Q9BUB5 465 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 SLC39A2Q9NP94 309 aa8.6□□□□□ -1.03
CNOT4-201ENST00000315544 E9PMD0 336 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 ZBTB39O15060 712 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 CYP1A2P05177 515 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 ADRB2P07550 413 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 KIF5BP33176 963 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 HSD17B3P37058 310 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 MRPS9P82933 396 aaKnown RBP8.59□□□□□ -1.03
CNOT4-201ENST00000315544 CAVIN4Q5BKX8 364 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 C11orf63Q6NUN7 778 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 UTP4Q969X6 686 aaKnown RBP8.59□□□□□ -1.03
CNOT4-201ENST00000315544 KREMEN1Q96MU8 473 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 MCMBPQ9BTE3 642 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 GRID1Q9ULK0 1009 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 MYPNQ86TC9 1320 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 ADGRA3Q8IWK6 1321 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 TTLL1O95922 423 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 CETPP11597 493 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 ACTN1P12814 892 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 GTF2BQ00403 316 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 COG2Q14746 738 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 PTGISQ16647 500 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 ERMARDQ5T6L9 678 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 CES4AQ5XG92 561 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 CRELD2Q6UXH1 353 aaPredicted RBP8.59□□□□□ -1.03
CNOT4-201ENST00000315544 NIPA1Q7RTP0 329 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 DNAAF5Q86Y56 855 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 CCDC148Q8NFR7 591 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 DPF3Q92784 378 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 ART4Q93070 314 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 TATDN2Q93075 761 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 IFT43Q96FT9 208 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 YY1AP1Q9H869 796 aa8.59□□□□□ -1.03
CNOT4-201ENST00000315544 LUC7L2Q9Y383 392 aaKnown RBP8.59□□□□□ -1.03
CNOT4-201ENST00000315544 F5H6K3 240 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 MAGEB2O15479 319 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 CCNT1O60563 726 aaKnown RBP8.59□□□□□ -1.04
CNOT4-201ENST00000315544 ITGB5P18084 799 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 KLRC2P26717 231 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 FGD1P98174 961 aa8.59□□□□□ -1.04
CNOT4-201ENST00000315544 CHAF1AQ13111 956 aaPredicted RBP8.59□□□□□ -1.04
CNOT4-201ENST00000315544 AP3B2Q13367 1082 aa8.59□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms