RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 DGKDQ16760 1214 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 NDUFAF2Q8N183 169 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 ERO1AQ96HE7 468 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 PPP2R2CQ9Y2T4 447 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 LRRIQ1Q96JM4 1722 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 PNPLA6Q8IY17 1366 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 PDE1BQ01064 536 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 CEP85LQ5SZL2 805 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 FBXO33Q7Z6M2 555 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 AGBL1Q96MI9 1066 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 LMTK2Q8IWU2 1503 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 A8MXQ7 604 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 NR3C1P04150 777 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 SATB1Q01826 763 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 MTMR3Q13615 1198 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 IQCB1Q15051 598 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 HS1BP3Q53T59 392 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 ATG4CQ96DT6 458 aa14.52□□□□□ -0.09
RFFL-201ENST00000315249 PP2D1A8MPX8 630 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 CREB3O43889 395 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 MB21D2Q8IYB1 491 aaPredicted RBP14.51□□□□□ -0.09
RFFL-201ENST00000315249 OPTNQ96CV9 577 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 RCOR1Q9UKL0 485 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 BAZ2BQ9UIF8 2168 aaKnown RBP14.51□□□□□ -0.09
RFFL-201ENST00000315249 PRRG1O14668 218 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 RGL2O15211 777 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 CPP00450 1065 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 CCDC62Q6P9F0 684 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 C16orf86Q6ZW13 317 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 COASYQ13057 564 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 PPP2R5EQ16537 467 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 LRRC31Q6UY01 552 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 HIP1RO75146 1068 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 NFKBIAP25963 317 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 CTNNA1P35221 906 aaKnown RBP14.51□□□□□ -0.09
RFFL-201ENST00000315249 SOX5P35711 763 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 TDRD7Q8NHU6 1098 aaKnown RBP14.51□□□□□ -0.09
RFFL-201ENST00000315249 NDST4Q9H3R1 872 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 AGO2Q9UKV8 859 aaKnown RBP14.51□□□□□ -0.09
RFFL-201ENST00000315249 DLC1Q96QB1 1528 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 PASKQ96RG2 1323 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 MOCS2O96007 188 aaPredicted RBP14.51□□□□□ -0.09
RFFL-201ENST00000315249 U2AF2P26368 475 aaKnown RBP eCLIP14.51□□□□□ -0.092e-6■■□□□ 12.6
RFFL-201ENST00000315249 CXCR5P32302 372 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 STMN2Q93045 179 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 ENC1O14682 589 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 LMNB2Q03252 620 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 PGBD3Q8N328 593 aa14.51□□□□□ -0.09
RFFL-201ENST00000315249 INHBAP08476 426 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 VAMP7P51809 220 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 C2CD2LO14523 706 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 RGS2P41220 211 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 SLC12A1Q13621 1099 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 ELF2Q15723 593 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 TKFCQ3LXA3 575 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 AFAP1L1Q8TED9 768 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 STK36Q9NRP7 1315 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 TRAPPC3O43617 180 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 PPP1R2P3Q6NXS1 205 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 CROCCP2Q86T23 111 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 SPATA24Q86W54 205 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 SCYL3Q8IZE3 742 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 SEPT1Q8WYJ6 367 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 RPGRIP1Q96KN7 1286 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 THAP9Q9H5L6 903 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 FARP1Q9Y4F1 1045 aaPredicted RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 PRKCBP05771 671 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 OR1G1P47890 313 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 FHDC1Q9C0D6 1143 aaPredicted RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 OLA1Q9NTK5 396 aaKnown RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 NBPF12Q5TAG4 269 aaPredicted RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 EIF3CLB5ME19 914 aaKnown RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 ERO1BQ86YB8 467 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 ARHGEF2Q92974 986 aaKnown RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 PGBD4Q96DM1 585 aa14.5□□□□□ -0.09
RFFL-201ENST00000315249 EIF3CQ99613 913 aaKnown RBP14.5□□□□□ -0.09
RFFL-201ENST00000315249 M0QYV0 167 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 CHGBP05060 677 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 PDHBP11177 359 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 SPATA2LQ8IUW3 424 aaPredicted RBP14.49□□□□□ -0.09
RFFL-201ENST00000315249 UBE4BO95155 1302 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 NR3C2P08235 984 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 SRGNP10124 158 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 DUOXA2Q1HG44 320 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 C11orf57Q6ZUT1 292 aaPredicted RBP14.49□□□□□ -0.09
RFFL-201ENST00000315249 MMTAG2Q9BU76 263 aaKnown RBP14.49□□□□□ -0.09
RFFL-201ENST00000315249 SIK2Q9H0K1 926 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 FBXO28Q9NVF7 368 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 STRIP2Q9ULQ0 834 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 NRXN1Q9ULB1 1477 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 SERPING1P05155 500 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 YY1P25490 414 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 PIK3R2O00459 728 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 TCP1P17987 556 aaKnown RBP14.49□□□□□ -0.09
RFFL-201ENST00000315249 STX2P32856 288 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 LRRC8AQ8IWT6 810 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 TSC1Q92574 1164 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 SPON2Q9BUD6 331 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 HAUS4Q9H6D7 363 aa14.49□□□□□ -0.09
RFFL-201ENST00000315249 DONSONQ9NYP3 566 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms