RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RAB20Q9NX57 234 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 EMSYQ7Z589 1322 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 GOLGA8SH3BPF8 625 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 EFNA5P52803 228 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 TRIM11Q96F44 468 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 NACA2Q9H009 215 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 ANKEF1Q9NU02 776 aa14.79□□□□□ -0.04
DDX54-202ENST00000314045 YDJCA8MPS7 323 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 PLS3P13797 630 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 ATP2A2P16615 1042 aaKnown RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 MAPK4P31152 587 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 DSG3P32926 999 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 PPP2R5EQ16537 467 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 EDRF1Q3B7T1 1238 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 ZNF394Q53GI3 561 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 RBM43Q6ZSC3 357 aaKnown RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 SAMD3Q8N6K7 520 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 OR6J1Q8NGC5 347 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 STMN4Q9H169 189 aaPredicted RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 SNX25Q9H3E2 840 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 GTF2A2P52657 109 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 RINT1Q6NUQ1 792 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 SRGAP1Q7Z6B7 1085 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 IQCGQ9H095 443 aaKnown RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 STIM2Q9P246 746 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 JRKLQ9Y4A0 524 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 E7EVH7 732 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 ACTR2P61160 394 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 ZNF746Q6NUN9 644 aaPredicted RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 ARFGAP2Q8N6H7 521 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 TOPORSQ9NS56 1045 aaPredicted RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 VPS18Q9P253 973 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 VWA5AO00534 786 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 GH1P01241 217 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 CXCR5P32302 372 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 TNFAIP2Q03169 654 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 DRAP1Q14919 205 aaPredicted RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 TWF2Q6IBS0 349 aaKnown RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 RDM1Q8NG50 284 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 FAM149B1Q96BN6 582 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 EDEM3Q9BZQ6 932 aa14.78□□□□□ -0.04
DDX54-202ENST00000314045 PDGFDQ9GZP0 370 aaPredicted RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 RBAKQ9NYW8 714 aaPredicted RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 AFDNP55196 1824 aaKnown RBP14.78□□□□□ -0.04
DDX54-202ENST00000314045 LRRC37A3O60309 1634 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 CXCL11O14625 94 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 PTPRAP18433 802 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 NR1I3Q14994 352 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 SLC30A10Q6XR72 485 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 GPD1LQ8N335 351 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 ZNF384Q8TF68 577 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 OPTNQ96CV9 577 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 RAB17Q9H0T7 212 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 SUCLA2Q9P2R7 463 aaPredicted RBP14.77□□□□□ -0.04
DDX54-202ENST00000314045 SYNPO2Q9UMS6 1093 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 RGPD1P0DJD0 1748 aa14.77□□□□□ -0.04
DDX54-202ENST00000314045 GOLGA6L7A0A1B0GV03 622 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 GABPAQ06546 454 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 TEX2Q8IWB9 1127 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 PAIP2Q9BPZ3 127 aaKnown RBP14.77□□□□□ -0.05
DDX54-202ENST00000314045 HINFPQ9BQA5 517 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 GPBP1L1Q9HC44 474 aaPredicted RBP14.77□□□□□ -0.05
DDX54-202ENST00000314045 ADGRG1Q9Y653 693 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 PGK2P07205 417 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 HOXD10P28358 340 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 LLGL1Q15334 1064 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 PHLDB2Q86SQ0 1253 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 INTS2Q9H0H0 1204 aaKnown RBP14.77□□□□□ -0.05
DDX54-202ENST00000314045 CAPN11Q9UMQ6 739 aa14.77□□□□□ -0.05
DDX54-202ENST00000314045 AHDC1Q5TGY3 1603 aaPredicted RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 RGPD5Q99666 1765 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 VPS41P49754 854 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 EMC2Q15006 297 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 Q4G0T1 1027 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 SLC51AQ86UW1 340 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 SPATC1LQ9H0A9 340 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 ZFYVE28Q9HCC9 887 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 HSPBP1Q9NZL4 362 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 HERVK_113P62684 666 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 IFRD2Q12894 506 aaPredicted RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 RUSC1Q9BVN2 902 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 GCOM2Q9BZD3 368 aaPredicted RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 MRPL47Q9HD33 250 aaKnown RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 PHRF1Q9P1Y6 1649 aaKnown RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 MED7O43513 233 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 CD44P16070 742 aaKnown RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 RNASELQ05823 741 aaKnown RBP14.76□□□□□ -0.05
DDX54-202ENST00000314045 BRD3Q15059 726 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 FBXL13Q8NEE6 735 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 ATRIPQ8WXE1 791 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 FUCA2Q9BTY2 467 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 TXNDC16Q9P2K2 825 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 TBC1D12O60347 775 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 PPFIA1Q13136 1202 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 KRT81Q14533 505 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 PPP1R2P3Q6NXS1 205 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 TATDN1Q6P1N9 297 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 DNAJC24Q6P3W2 148 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 KSR1Q8IVT5 923 aa14.76□□□□□ -0.05
DDX54-202ENST00000314045 CCDC117Q8IWD4 279 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms