RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 BHMT2Q9H2M3 363 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 SLC39A2Q9NP94 309 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 ETAA1Q9NY74 926 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 RNF14Q9UBS8 474 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 CAPN15O75808 1086 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 TNNC2P02585 160 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 PLS3P13797 630 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 RTP1P59025 263 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 ZNF484Q5JVG2 852 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 ATG4CQ96DT6 458 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 CEP72Q9P209 647 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 TRPC6Q9Y210 931 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 UBIAD1Q9Y5Z9 338 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 MYH1P12882 1939 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 DDX39AO00148 427 aaKnown RBP6.52□□□□□ -1.37
SEC22A-201ENST00000309934 ZNF189O75820 626 aaPredicted RBP6.52□□□□□ -1.37
SEC22A-201ENST00000309934 KCNA3P22001 575 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 GTF2H1P32780 548 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 PHKA2P46019 1235 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 RPS6P62753 249 aaKnown RBP6.52□□□□□ -1.37
SEC22A-201ENST00000309934 EXOC3L4Q17RC7 722 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 MICAL1Q8TDZ2 1067 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 SOCS4Q8WXH5 440 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 C16orf45Q96MC5 204 aaPredicted RBP6.52□□□□□ -1.37
SEC22A-201ENST00000309934 PDCD2LQ9BRP1 358 aa6.52□□□□□ -1.37
SEC22A-201ENST00000309934 AGO4Q9HCK5 861 aaKnown RBP6.52□□□□□ -1.37
SEC22A-201ENST00000309934 POTEMA6NI47 508 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 WTIPA6NIX2 430 aaPredicted RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 CYP11B2P19099 503 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 GHRHRQ02643 423 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TRPC3Q13507 836 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 NFIL3Q16649 462 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 DCAF17Q5H9S7 520 aaPredicted RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SH3BP5LQ7L8J4 393 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TRIM74Q86UV6 250 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TRIM73Q86UV7 250 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 HOOK3Q86VS8 718 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 ZFPM1Q8IX07 1006 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TRIM58Q8NG06 486 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SAAL1Q96ER3 474 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 NDST4Q9H3R1 872 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 ECM29Q5VYK3 1845 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 CCL15-CCL14A0A0B4J2E2 113 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TRIM66O15016 1216 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 HBP1O60381 514 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TPP2P29144 1249 aaPredicted RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 YWHABP31946 246 aaKnown RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 PRCPP42785 496 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 GNG11P61952 73 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 GRB10Q13322 594 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 MTA1Q13330 715 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 CCL15Q16663 113 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 IER5Q5VY09 327 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 XXYLT1Q8NBI6 393 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SPATA20Q8TB22 786 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 CPLX3Q8WVH0 158 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SPIRE2Q8WWL2 714 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 PSPC1Q8WXF1 523 aaKnown RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 RUNDC3BQ96NL0 473 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TSPAN18Q96SJ8 248 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 FERMT1Q9BQL6 677 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SPATC1LQ9H0A9 340 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TMEM60Q9H2L4 133 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 KCNH7Q9NS40 1196 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 C1orf112Q9NSG2 853 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 DIS3Q9Y2L1 958 aaKnown RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 CNTNAP1P78357 1384 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 GTPBP10A4D1E9 387 aaKnown RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SMAPO00193 183 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TNFAIP3P21580 790 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 YARSP54577 528 aaKnown RBP6.51□□□□□ -1.37
SEC22A-201ENST00000309934 MYL7Q01449 175 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 PGM5Q15124 567 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 KRT31Q15323 416 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 TNS4Q8IZW8 715 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 SEZ6LQ9BYH1 1024 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 RABL2BQ9UNT1 228 aa6.51□□□□□ -1.37
SEC22A-201ENST00000309934 IGSF9BQ9UPX0 1349 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 POTEB3A0JP26 581 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 POTECB2RU33 542 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 M0R2N6 131 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 RIOK3O14730 519 aaKnown RBP6.5□□□□□ -1.37
SEC22A-201ENST00000309934 MEIS2O14770 477 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 NR3C1P04150 777 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SERPING1P05155 500 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 INPP5BP32019 993 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 ICAM3P32942 547 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 RGS2P41220 211 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 MAGEA9P43362 315 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 HERVK_113P62684 666 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 CDK17Q00537 523 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 CYP4A11Q02928 519 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 KLHL30Q0D2K2 578 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 POTEBQ6S5H4 581 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 LBX2Q6XYB7 198 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 NT5C1BQ96P26 610 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 CPVLQ9H3G5 476 aa6.5□□□□□ -1.37
SEC22A-201ENST00000309934 SEPT11Q9NVA2 429 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms