RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 SYNGAP1Q96PV0 1343 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 LY6KQ17RY6 165 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 HAUS6Q7Z4H7 955 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 MS4A4AQ96JQ5 239 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 UBE4BO95155 1302 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 LRRC53A6NM62 1247 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 NOL4O94818 638 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 PLEKP08567 350 aaPredicted RBP24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 RDH13Q8NBN7 331 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 TRIM10Q9UDY6 481 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 WDR81Q562E7 1941 aa24.61■■□□□ 1.53
PDLIM2-202ENST00000308354 CCDC169A6NNP5 214 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 PDHXO00330 501 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 SLC16A3O15427 465 aaKnown RBP24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 TADA3O75528 432 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 ATP4AP20648 1035 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 CACNA2D4Q7Z3S7 1137 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 FAM186BQ8IYM0 893 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 SLC35F6Q8N357 371 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 PCIF1Q9H4Z3 704 aa24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 NHEJ1Q9H9Q4 299 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 GBA2Q9HCG7 927 aaPredicted RBP24.6■■□□□ 1.53
PDLIM2-202ENST00000308354 CCL15-CCL14A0A0B4J2E2 113 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 SOCS7O14512 581 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 CELF2O95319 508 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 AFPP02771 609 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 CCL15Q16663 113 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 MTERF2Q49AM1 385 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 ANKRD13CQ8N6S4 541 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 BSNDQ8WZ55 320 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 BAP1Q92560 729 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 SLC35C1Q96A29 364 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 IQCDQ96DY2 449 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 ZNF302Q9NR11 478 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 CYP26B1Q9NR63 512 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 TFR2Q9UP52 801 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 BTBD19C9JJ37 291 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 FARP2O94887 1054 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 ARIH2O95376 493 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 PSMC2P35998 433 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 FBXO38Q6PIJ6 1188 aa24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 CCDC94Q9BW85 323 aaPredicted RBP24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 METTL14Q9HCE5 456 aaKnown RBP24.59■■□□□ 1.53
PDLIM2-202ENST00000308354 DKC1O60832 514 aaKnown RBP eCLIP24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 ACTN1P12814 892 aa24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 POLR2FP61218 127 aaKnown RBP24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 PPP2R3AQ06190 1150 aa24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 BORCS6Q96GS4 357 aa24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 TIPINQ9BVW5 301 aa24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 PLAGL2Q9UPG8 496 aa24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 IGSF9BQ9UPX0 1349 aa24.58■■□□□ 1.53
PDLIM2-202ENST00000308354 DNAJC25-GNG10A0A024R161 153 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 ATG7O95352 703 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 GGPS1O95749 300 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 SLC9A1P19634 815 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 NPTX2P47972 431 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 BRI3BPQ8WY22 251 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 UBXN4Q92575 508 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 MROH8Q9H579 483 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 XPNPEP1Q9NQW7 623 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 DMAC2Q9NW81 257 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 PNMA3Q9UL41 463 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 GUCA1BQ9UMX6 200 aa24.58■■□□□ 1.52
PDLIM2-202ENST00000308354 GSTTP1A0A1W2PQM5 241 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 MAPTP10636 758 aaKnown RBP24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 CETPP11597 493 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 CYLC1P35663 651 aaPredicted RBP24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 NFIL3Q16649 462 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 FBXO16Q8IX29 292 aaPredicted RBP24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 ACCSQ96QU6 501 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 MAFBQ9Y5Q3 323 aaPredicted RBP24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 EFCAB8A8MWE9 144 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 EXOC3O60645 756 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 NCKAP1LP55160 1127 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 GTF2BQ00403 316 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 XKR3Q5GH77 459 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 TMEM63BQ5T3F8 832 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 CBWD1Q9BRT8 395 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 TMEM206Q9H813 350 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 FRMD4BQ9Y2L6 1034 aa24.57■■□□□ 1.52
PDLIM2-202ENST00000308354 CTAGE9A4FU28 777 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 CDK17Q00537 523 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 DMP1Q13316 513 aaPredicted RBP24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 CCDC170Q8IYT3 715 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 ZSWIM2Q8NEG5 633 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 PCYT2Q99447 389 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 ARHGAP20Q9P2F6 1191 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 MYO1AQ9UBC5 1043 aa24.56■■□□□ 1.52
PDLIM2-202ENST00000308354 DGAT1O75907 488 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 HNRNPH3P31942 346 aaKnown RBP24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 COPB2P35606 906 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 GTF2A2P52657 109 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 KRT83P78385 493 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 TMEM161BQ8NDZ6 487 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 GPRC5AQ8NFJ5 357 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 MLXIPQ9HAP2 919 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 PDLIM7Q9NR12 457 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 NEDD9Q14511 834 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 PDXDC1Q6P996 788 aa24.55■■□□□ 1.52
PDLIM2-202ENST00000308354 C2orf69Q8N8R5 385 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms