RNA–Protein interactions for RNA: ENST00000307198.11

LRTOMT-202, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LRTOMT, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-202ENST00000307198 ROPN1Q9HAT0 212 aaPredicted RBP11.4□□□□□ -0.58
LRTOMT-202ENST00000307198 ANKIB1Q9P2G1 1089 aa11.4□□□□□ -0.58
LRTOMT-202ENST00000307198 CPSF2Q9P2I0 782 aaKnown RBP11.4□□□□□ -0.58
LRTOMT-202ENST00000307198 SLC37A4O43826 429 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 PDE6BP35913 854 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 CCDC15Q0P6D6 951 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 ADAM9Q13443 819 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 UBE4AQ14139 1066 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 UBAP2Q5T6F2 1119 aaKnown RBP11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 THEMIS2Q5TEJ8 643 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 SLC30A9Q6PML9 568 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 EXOC3L1Q86VI1 746 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 NELFCDQ8IXH7 590 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 OLIG1Q8TAK6 271 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 SCFD1Q8WVM8 642 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 RFFLQ8WZ73 363 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 RAB3IPQ96QF0 476 aaPredicted RBP11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 FAM167BQ9BTA0 163 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 TRIM7Q9C029 511 aa11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 MTRF1LQ9UGC7 380 aaKnown RBP11.4□□□□□ -0.59
LRTOMT-202ENST00000307198 KLRF2D3W0D1 207 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CETN3O15182 167 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 IL6STP40189 918 aaPredicted RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CTCFP49711 727 aaPredicted RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 GALCP54803 685 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CCDC38Q502W7 563 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 RNF43Q68DV7 783 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 BARGINQ6ZT62 677 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 FRMD5Q7Z6J6 570 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 PPP1R9AQ9ULJ8 1098 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 AP1G2O75843 785 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 AFPP02771 609 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 EXOC3L4Q17RC7 722 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 PARP6Q2NL67 630 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 SOGA3Q5TF21 947 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CCDC65Q8IXS2 484 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 SLC30A5Q8TAD4 765 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 DYDC1Q8WWB3 177 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 SLC4A9Q96Q91 983 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 SIX2Q9NPC8 291 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 PCDHA3Q9Y5H8 950 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 EDIL3O43854 480 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 HIP1RO75146 1068 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 PHF2O75151 1096 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 TMEM253P0C7T8 217 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 RARGP13631 454 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 RPL21P46778 160 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 MRPS35P82673 323 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 TRAF1Q13077 416 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 ECM1Q16610 540 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CAVIN4Q5BKX8 364 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 HYIQ5T013 277 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 C12orf60Q5U649 245 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CWF19L1Q69YN2 538 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 ANO7Q6IWH7 933 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 U2AF1L4Q8WU68 220 aaKnown RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 CKAP2Q8WWK9 683 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 OSGEPQ9NPF4 335 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 BSDC1Q9NW68 430 aaPredicted RBP11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 PCYOX1Q9UHG3 505 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 TRIM33Q9UPN9 1127 aa11.39□□□□□ -0.59
LRTOMT-202ENST00000307198 ABCA3Q99758 1704 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 PODXLO00592 558 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 UNC5CO95185 931 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 NPTXRO95502 500 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 HSPA6P17066 643 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 VCAM1P19320 739 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 CHRNA3P32297 505 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 COPB2P35606 906 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 SLCO1A2P46721 670 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 ACVR2BQ13705 512 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 EPHA7Q15375 998 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 SGSM1Q2NKQ1 1148 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 ZNF568Q3ZCX4 644 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 NUGGCQ68CJ6 796 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 VSTM1Q6UX27 236 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 SLC35G2Q8TBE7 412 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 RUNDC3BQ96NL0 473 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 TMEM47Q9BQJ4 181 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 RNPEPL1Q9HAU8 725 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 BIN2Q9UBW5 565 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 DPPA5A6NC42 116 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 USP17L3A6NCW0 530 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 USP17L4A6NCW7 530 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 TDP2O95551 362 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 USP17L8P0C7I0 530 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 ALAS1P13196 640 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 PAPOLAP51003 745 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 RPS6KA3P51812 740 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 ROR2Q01974 943 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 LBRQ14739 615 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 USP17L1Q7RTZ2 530 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 ANKLE1Q8NAG6 615 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 UTP4Q969X6 686 aaKnown RBP11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 RMDN2Q96LZ7 410 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 BMP2KQ9NSY1 1161 aaPredicted RBP11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 EMILIN3Q9NT22 766 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 TMEM260Q9NX78 707 aa11.38□□□□□ -0.59
LRTOMT-202ENST00000307198 MCM9Q9NXL9 1143 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms