RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ITGA4P13612 1032 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CIITAP33076 1130 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 SLC26A2P50443 739 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 KNOP1Q1ED39 458 aaKnown RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 SLC30A10Q6XR72 485 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 GPR142Q7Z601 462 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CTAGE6Q86UF2 777 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CTAGE4Q8IX94 777 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 DAGLBQ8NCG7 672 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 ZNF560Q96MR9 790 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TUT1Q9H6E5 874 aaKnown RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 ANKEF1Q9NU02 776 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TMEM39AQ9NV64 488 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 PCDHB7Q9Y5E2 793 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 GAS2O43903 313 aaKnown RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TADA2AO75478 443 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 EZRP15311 586 aaKnown RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TERF1P54274 439 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TEX2Q8IWB9 1127 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 SYCE1Q8N0S2 351 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 APBA2Q99767 749 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 IFIH1Q9BYX4 1025 aaKnown RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 RBAKQ9NYW8 714 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 KCND2Q9NZV8 630 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 BTBD19C9JJ37 291 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 FERP16591 822 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 IQSEC1Q6DN90 963 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 PDZD4Q76G19 769 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TYW1Q9NV66 732 aaKnown RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 PRMT7Q9NVM4 692 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 IMPACTQ9P2X3 320 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 YBX3P16989 372 aaKnown RBP eCLIP10.03□□□□□ -0.8
PTPRE-202ENST00000306042 PGM5Q15124 567 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 DPCR1Q3MIW9 517 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 SEPT8Q92599 483 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 SAAL1Q96ER3 474 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CCDC51Q96ER9 411 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CAPZA3Q96KX2 299 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 CCSER1Q9C0I3 900 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 RBSNQ9H1K0 784 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 AAASQ9NRG9 546 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 TXNDC16Q9P2K2 825 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 KCPQ6ZWJ8 1503 aa10.03□□□□□ -0.8
PTPRE-202ENST00000306042 GPR182O15218 404 aa10.02□□□□□ -0.8
PTPRE-202ENST00000306042 NPEPPSP55786 919 aa10.02□□□□□ -0.8
PTPRE-202ENST00000306042 GABPAQ06546 454 aa10.02□□□□□ -0.8
PTPRE-202ENST00000306042 FAM110CQ1W6H9 321 aa10.02□□□□□ -0.8
PTPRE-202ENST00000306042 SECISBP2LQ93073 1101 aaKnown RBP10.02□□□□□ -0.8
PTPRE-202ENST00000306042 SPDYE16A6NNV3 312 aaPredicted RBP10.02□□□□□ -0.81
PTPRE-202ENST00000306042 SLC26A4O43511 780 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 SLURP2P0DP57 97 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 ARP10275 920 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 RPA1P27694 616 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 FLT3LGP49771 235 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 FSCN1Q16658 493 aaKnown RBP10.02□□□□□ -0.81
PTPRE-202ENST00000306042 LY6KQ17RY6 165 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 MOXD1Q6UVY6 613 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 GPD1LQ8N335 351 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 DYDC1Q8WWB3 177 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 PPP1R12CQ9BZL4 782 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 SENP6Q9GZR1 1112 aaPredicted RBP10.02□□□□□ -0.81
PTPRE-202ENST00000306042 FAM169AQ9Y6X4 670 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 STRCQ7RTU9 1775 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 SKIP12755 728 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 ZNF445P59923 1031 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 VEPH1Q14D04 833 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 NUDT18Q6ZVK8 323 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 UNC45AQ9H3U1 944 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 THAP9Q9H5L6 903 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 BZW2Q9Y6E2 419 aaKnown RBP10.02□□□□□ -0.81
PTPRE-202ENST00000306042 TUBB4AP04350 444 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 CASP1P29466 404 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 CALCOCO2Q13137 446 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 DUOXA2Q1HG44 320 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 PPP1R2P3Q6NXS1 205 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 NOTUMQ6P988 496 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 PEX26Q7Z412 305 aa10.02□□□□□ -0.81
PTPRE-202ENST00000306042 KIAA0391O15091 583 aaKnown RBP10.01□□□□□ -0.81
PTPRE-202ENST00000306042 ZNF286BP0CG31 522 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
PTPRE-202ENST00000306042 GCLMP48507 274 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 KRT17Q04695 432 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 DGKZQ13574 1117 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 NAALADL2Q58DX5 795 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 MUM1L1Q5H9M0 696 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 TREML2Q5T2D2 321 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 TATDN1Q6P1N9 297 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 ZNF365Q70YC5 407 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 KCTD17Q8N5Z5 321 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 ZMYND15Q9H091 742 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
PTPRE-202ENST00000306042 A6NJR5 290 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 GOLGA8SH3BPF8 625 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 H2AFZP0C0S5 128 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 PLS3P13797 630 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 TAL1P17542 331 aaPredicted RBP10.01□□□□□ -0.81
PTPRE-202ENST00000306042 NMT1P30419 496 aaKnown RBP10.01□□□□□ -0.81
PTPRE-202ENST00000306042 ADCYAP1R1P41586 468 aa10.01□□□□□ -0.81
PTPRE-202ENST00000306042 ADKP55263 362 aaKnown RBP10.01□□□□□ -0.81
PTPRE-202ENST00000306042 OR6B2Q6IFH4 312 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms