RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 HOOK1Q9UJC3 728 aaKnown RBP30.08■■■□□ 2.41
HDAC3-201ENST00000305264 ODF2LQ9ULJ1 636 aa30.08■■■□□ 2.41
HDAC3-201ENST00000305264 GAS2O43903 313 aaKnown RBP30.08■■■□□ 2.41
HDAC3-201ENST00000305264 IDEP14735 1019 aa30.08■■■□□ 2.41
HDAC3-201ENST00000305264 SNX17Q15036 470 aa30.08■■■□□ 2.41
HDAC3-201ENST00000305264 FAM49AQ9H0Q0 323 aaPredicted RBP30.08■■■□□ 2.41
HDAC3-201ENST00000305264 SFI1A8K8P3 1242 aa30.07■■■□□ 2.4
HDAC3-201ENST00000305264 SERINC5Q86VE9 423 aa30.07■■■□□ 2.4
HDAC3-201ENST00000305264 FAM126BQ8IXS8 530 aa30.07■■■□□ 2.4
HDAC3-201ENST00000305264 WNT8BQ93098 351 aa30.07■■■□□ 2.4
HDAC3-201ENST00000305264 SEZ6LQ9BYH1 1024 aa30.07■■■□□ 2.4
HDAC3-201ENST00000305264 KLRC4O43908 158 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 TBCAO75347 108 aaKnown RBP30.06■■■□□ 2.4
HDAC3-201ENST00000305264 CCDC183Q5T5S1 534 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 KIAA0319LQ8IZA0 1049 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 TNS4Q8IZW8 715 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 DRC1Q96MC2 740 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 ZHX3Q9H4I2 956 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 SMIM35A0A1B0GVV1 85 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 PQBP1O60828 265 aaKnown RBP30.06■■■□□ 2.4
HDAC3-201ENST00000305264 ARL2P36404 184 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 ASAP3Q8TDY4 903 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 BSNDQ8WZ55 320 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 SUCLA2Q9P2R7 463 aaPredicted RBP30.06■■■□□ 2.4
HDAC3-201ENST00000305264 NOD1Q9Y239 953 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 PCDHA5Q9Y5H7 936 aa30.06■■■□□ 2.4
HDAC3-201ENST00000305264 FRMD3A2A2Y4 597 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 FAM13AO94988 1023 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 TMOD1P28289 359 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 ZNF131P52739 623 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 TRIM60Q495X7 471 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 IER5Q5VY09 327 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 DNAJB3Q8WWF6 145 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 TCP11Q8WWU5 503 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 KIFAP3Q92845 792 aa30.05■■■□□ 2.4
HDAC3-201ENST00000305264 RPN1P04843 607 aaKnown RBP30.04■■■□□ 2.4
HDAC3-201ENST00000305264 DNM2P50570 870 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 C1orf53Q5VUE5 145 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 TAF2Q6P1X5 1199 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 UNC13DQ70J99 1090 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 PRPF31Q8WWY3 499 aaKnown RBP30.04■■■□□ 2.4
HDAC3-201ENST00000305264 PSPC1Q8WXF1 523 aaKnown RBP30.04■■■□□ 2.4
HDAC3-201ENST00000305264 PANK4Q9NVE7 773 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 AKT3Q9Y243 479 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 VTNP04004 478 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 LRRC26Q2I0M4 334 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 KSR1Q8IVT5 923 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 SPATA20Q8TB22 786 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 DHX38Q92620 1227 aaKnown RBP30.04■■■□□ 2.4
HDAC3-201ENST00000305264 PARVGQ9HBI0 331 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 MROH7Q68CQ1 1323 aa30.04■■■□□ 2.4
HDAC3-201ENST00000305264 CCDC85CA6NKD9 419 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 GLRA2P23416 452 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 COASYQ13057 564 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 MAP7D2Q96T17 732 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 PPP1R16BQ96T49 567 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 CD4P01730 458 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 KMT5BQ4FZB7 885 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 ANKRD33Q7Z3H0 272 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 SFR1Q86XK3 245 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 RHPN2Q8IUC4 686 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 CCDC65Q8IXS2 484 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 SMARCE1Q969G3 411 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 COL4A3BPQ9Y5P4 624 aa30.03■■■□□ 2.4
HDAC3-201ENST00000305264 TMEM62Q0P6H9 643 aa30.02■■■□□ 2.4
HDAC3-201ENST00000305264 LAMTOR4Q0VGL1 99 aa30.02■■■□□ 2.4
HDAC3-201ENST00000305264 PTK7Q13308 1070 aa30.02■■■□□ 2.4
HDAC3-201ENST00000305264 MYCT1Q8N699 235 aa30.02■■■□□ 2.4
HDAC3-201ENST00000305264 HPS3Q969F9 1004 aa30.02■■■□□ 2.4
HDAC3-201ENST00000305264 SYAP1Q96A49 352 aaPredicted RBP30.02■■■□□ 2.4
HDAC3-201ENST00000305264 ZNF668Q96K58 619 aaPredicted RBP30.02■■■□□ 2.4
HDAC3-201ENST00000305264 KIAA1468Q9P260 1216 aa30.02■■■□□ 2.4
HDAC3-201ENST00000305264 PVALEFA0A1B0GWK0 134 aa30.01■■■□□ 2.4
HDAC3-201ENST00000305264 SMC2O95347 1197 aa30.01■■■□□ 2.4
HDAC3-201ENST00000305264 PLS3P13797 630 aa30.01■■■□□ 2.4
HDAC3-201ENST00000305264 RTP1P59025 263 aa30.01■■■□□ 2.4
HDAC3-201ENST00000305264 TLE2Q04725 743 aa30.01■■■□□ 2.4
HDAC3-201ENST00000305264 ATP11BQ9Y2G3 1177 aa30.01■■■□□ 2.4
HDAC3-201ENST00000305264 ALPK3Q96L96 1907 aa30.01■■■□□ 2.39
HDAC3-201ENST00000305264 SARSP49591 514 aaKnown RBP30.01■■■□□ 2.39
HDAC3-201ENST00000305264 PEX3P56589 373 aa30.01■■■□□ 2.39
HDAC3-201ENST00000305264 EHHADHQ08426 723 aa30.01■■■□□ 2.39
HDAC3-201ENST00000305264 CAPSQ13938 189 aa30.01■■■□□ 2.39
HDAC3-201ENST00000305264 HERC4Q5GLZ8 1057 aaPredicted RBP30.01■■■□□ 2.39
HDAC3-201ENST00000305264 ODR4Q5SWX8 454 aa30.01■■■□□ 2.39
HDAC3-201ENST00000305264 RBM43Q6ZSC3 357 aaKnown RBP30.01■■■□□ 2.39
HDAC3-201ENST00000305264 NT5DC1Q5TFE4 455 aa30■■■□□ 2.39
HDAC3-201ENST00000305264 KIFC3Q9BVG8 833 aa30■■■□□ 2.39
HDAC3-201ENST00000305264 EXOC1Q9NV70 894 aa30■■■□□ 2.39
HDAC3-201ENST00000305264 TBC1D7Q9P0N9 293 aa30■■■□□ 2.39
HDAC3-201ENST00000305264 LARSQ9P2J5 1176 aaKnown RBP30■■■□□ 2.39
HDAC3-201ENST00000305264 GAP43P17677 238 aa29.99■■■□□ 2.39
HDAC3-201ENST00000305264 DMP1Q13316 513 aaPredicted RBP29.99■■■□□ 2.39
HDAC3-201ENST00000305264 MXD4Q14582 209 aaPredicted RBP29.99■■■□□ 2.39
HDAC3-201ENST00000305264 TRIM71Q2Q1W2 868 aaKnown RBP29.99■■■□□ 2.39
HDAC3-201ENST00000305264 NLRP4Q96MN2 994 aa29.99■■■□□ 2.39
HDAC3-201ENST00000305264 GSDMAQ96QA5 445 aa29.99■■■□□ 2.39
HDAC3-201ENST00000305264 SIP14410 1827 aa29.99■■■□□ 2.39
HDAC3-201ENST00000305264 NPTX2P47972 431 aa29.99■■■□□ 2.39
HDAC3-201ENST00000305264 IFT74Q96LB3 600 aa29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms