RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 CRLF3Q8IUI8 442 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 ORC6Q9Y5N6 252 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 COPEO14579 308 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 TMPRSS15P98073 1019 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 FAM47EQ6ZV65 393 aa14.92□□□□□ -0.02
PRKCB-201ENST00000303531 BZW1Q7L1Q6 419 aaKnown RBP14.92□□□□□ -0.02
PRKCB-201ENST00000303531 CELF1Q92879 486 aaKnown RBP14.92□□□□□ -0.02
PRKCB-201ENST00000303531 RPS6KA4O75676 772 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TMEM35BQ8NCS4 154 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 MCPH1Q8NEM0 835 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 RNF139Q8WU17 664 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 FAM213AQ9BRX8 229 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TARBP1Q13395 1621 aaKnown RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 NVLO15381 856 aaKnown RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 AP1ARQ63HQ0 302 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 CIAPIN1Q6FI81 312 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TMED8Q6PL24 325 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 SYT2Q8N9I0 419 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 MASTLQ96GX5 879 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 CD209Q9NNX6 404 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 E2F4Q16254 413 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 KRT27Q7Z3Y8 459 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 NUP85Q9BW27 656 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 DRC3Q9H069 523 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 PMS2P54278 862 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 ESRRGP62508 458 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF564Q8TBZ8 553 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF526Q8TF50 670 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.91□□□□□ -0.022e-10■■■■■ 82.5
PRKCB-201ENST00000303531 FGD4Q96M96 766 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 SERPINI1Q99574 410 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 C11orf70Q9BRQ4 267 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 LRFN2Q9ULH4 789 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 AXIN2Q9Y2T1 843 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 WDR64B1ANS9 1081 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 GOLGA8MH3BSY2 632 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 SLC27A3Q5K4L6 730 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 BEND6Q5SZJ8 279 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TTC1Q99614 292 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 DDX47Q9H0S4 455 aaKnown RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF335Q9H4Z2 1342 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 STAT3P40763 770 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 ORC2Q13416 577 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 CLEC17AQ6ZS10 378 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TRIM67Q6ZTA4 783 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 PIP4K2CQ8TBX8 421 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 TRIM55Q9BYV6 548 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 PACSIN2Q9UNF0 486 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 MROH7-TTC4A0A0A0MT08 1334 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 HSPA4LO95757 839 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 SRRM1Q8IYB3 904 aaKnown RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 FAM49AQ9H0Q0 323 aaPredicted RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 KIAA1586Q9HCI6 787 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 RAVER2Q9HCJ3 691 aaKnown RBP14.91□□□□□ -0.02
PRKCB-201ENST00000303531 ABCC3O15438 1527 aa14.91□□□□□ -0.02
PRKCB-201ENST00000303531 DRAP1Q14919 205 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 EPM2AIP1Q7L775 607 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 MRFAP1Q9Y605 127 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 NKX1-1Q15270 411 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 RCSD1Q6JBY9 416 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 KRT80Q6KB66 452 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 XAB2Q9HCS7 855 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 SPDYE2BA6NHP3 402 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 PPFIA2O75334 1257 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 MMP10P09238 476 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 SPDYE6P0CI01 402 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 VAMP7P51809 220 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF699Q32M78 642 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 RWDD4Q6NW29 188 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 KLC3Q6P597 504 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 DSTYKQ6XUX3 929 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 CYTH2Q99418 400 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 INTS2Q9H0H0 1204 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 COL15A1P39059 1388 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 TADA3O75528 432 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 APOEP02649 317 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 PMLP29590 882 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 RC3H1Q5TC82 1133 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 RNF168Q8IYW5 571 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 TDRD3Q9H7E2 651 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 SPATS2LQ9NUQ6 558 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 TTC7AQ9ULT0 858 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 GRID2IPA4D2P6 1211 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 MYO1CO00159 1063 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 ATP2C1P98194 919 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 ZNF746Q6NUN9 644 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 N4BP2L2Q92802 583 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 CALR3Q96L12 384 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 TBC1D22BQ9NU19 505 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 PPARGC1AQ9UBK2 798 aaKnown RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 TDP2O95551 362 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 FCER1AP12319 257 aa14.9□□□□□ -0.02
PRKCB-201ENST00000303531 RNF25Q96BH1 459 aaPredicted RBP14.9□□□□□ -0.02
PRKCB-201ENST00000303531 ANXA13P27216 316 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 HP1BP3Q5SSJ5 553 aaPredicted RBP14.89□□□□□ -0.03
PRKCB-201ENST00000303531 EP400NLQ6ZTU2 488 aa14.89□□□□□ -0.03
PRKCB-201ENST00000303531 STOX1Q6ZVD7 989 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms