RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 CCDC78A2IDD5 438 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 SUPT3HO75486 399 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 IL10P22301 178 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 PSMA3P25788 255 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 SCN4BQ8IWT1 228 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ENAHQ8N8S7 591 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 APPL2Q8NEU8 664 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 NHEJ1Q9H9Q4 299 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 NDE1Q9NXR1 346 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 RGL1Q9NZL6 768 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 PCDHA4Q9UN74 947 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 UBN2Q6ZU65 1347 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 EIF4G3O43432 1585 aaKnown RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 PSAPP07602 524 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 BRD2P25440 801 aaKnown RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 CCDC142Q17RM4 750 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 KCNV2Q8TDN2 545 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 COG1Q8WTW3 980 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 FAM161BQ96MY7 647 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ACAP3Q96P50 834 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 YIPF2Q9BWQ6 316 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ADNPQ9H2P0 1102 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 SLC24A3Q9HC58 644 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 DMAP1Q9NPF5 467 aaPredicted RBP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 AIPL1Q9NZN9 384 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 FBXL5Q9UKA1 691 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.07□□□□□ -0.64
CLIP1-201ENST00000302528 PCDHA5Q9Y5H7 936 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 PCDHA13Q9Y5I0 950 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ZMYM3Q14202 1370 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 ARHGEF5Q12774 1597 aa11.07□□□□□ -0.64
CLIP1-201ENST00000302528 S100A5P33763 92 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 TAS2R42Q7RTR8 314 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PNMA6EA0A0J9YXQ4 647 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 ADCY3O60266 1144 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 SEC24DO94855 1032 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 NFX1Q12986 1120 aaKnown RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 KLHL38Q2WGJ6 581 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 EPM2AIP1Q7L775 607 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 TRIM69Q86WT6 500 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 SMYD4Q8IYR2 804 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 CCDC17Q96LX7 622 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 NLRP4Q96MN2 994 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PHLPP2Q6ZVD8 1323 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 GCFC2P16383 781 aaKnown RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 TFDP2Q14188 446 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 ZNF658Q5TYW1 1059 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 ARHGEF25Q86VW2 580 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PLD3Q8IV08 490 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 EDC3Q96F86 508 aaKnown RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 SLC52A2Q9HAB3 445 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 CYP4F11Q9HBI6 524 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 BABAM1Q9NWV8 329 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PLAAQ9Y263 795 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 TARBP1Q13395 1621 aaKnown RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 UBA6A0AVT1 1052 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 C5orf58C9J3I9 102 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 ZNF500O60304 480 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 FGGP02679 453 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 ZNF667Q5HYK9 610 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PKN3Q6P5Z2 889 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 KCTD1Q719H9 257 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 EXOC4Q96A65 974 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PARVGQ9HBI0 331 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 SPTLC3Q9NUV7 552 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 HEY1Q9Y5J3 304 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 CLRN2A0PK11 232 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 GOLGA8MH3BSY2 632 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PODXLO00592 558 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 LZTS3O60299 673 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 BCAMP50895 628 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 NR5A1Q13285 461 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 PDCLQ13371 301 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 RARS2Q5T160 578 aaKnown RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 APOA5Q6Q788 366 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 RBM41Q96IZ5 413 aaKnown RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 EMILIN3Q9NT22 766 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.06□□□□□ -0.64
CLIP1-201ENST00000302528 NFU1Q9UMS0 254 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 ABCC2Q92887 1545 aa11.06□□□□□ -0.64
CLIP1-201ENST00000302528 GOLGA8IPA6NC78 632 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 GOLGA8JA6NMD2 632 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 PRAMEP78395 509 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 NR1H3Q13133 447 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 C16orf72Q14CZ0 275 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 PDXDC2PQ6P474 469 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 CATSPER4Q7RTX7 472 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 RHOT2Q8IXI1 618 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 ARHGAP18Q8N392 663 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 TBC1D19Q8N5T2 526 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 TTC13Q8NBP0 860 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 FAM49AQ9H0Q0 323 aaPredicted RBP11.05□□□□□ -0.64
CLIP1-201ENST00000302528 DYRK4Q9NR20 520 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 C6orf203Q9P0P8 240 aaPredicted RBP11.05□□□□□ -0.64
CLIP1-201ENST00000302528 LVRNQ6Q4G3 990 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 RASSF3Q86WH2 238 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 FAM167BQ9BTA0 163 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 AURKCQ9UQB9 309 aa11.05□□□□□ -0.64
CLIP1-201ENST00000302528 TRAF3IP3Q9Y228 551 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms