RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 NUDCD1Q96RS6 583 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 RPS6KC1Q96S38 1066 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 PIGSQ96S52 555 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 POP1Q99575 1024 aaKnown RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 TRIM7Q9C029 511 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 EMILIN3Q9NT22 766 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 SUCLA2Q9P2R7 463 aaPredicted RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 SAP30BPQ9UHR5 308 aaKnown RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 ARL2BPQ9Y2Y0 163 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 RPTORQ8N122 1335 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 KIAA0391O15091 583 aaKnown RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 CLIC2O15247 247 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 GBP1P32455 592 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 RFC5P40937 340 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 ERFP50548 548 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 TRAF1Q13077 416 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 ZDHHC24Q6UX98 284 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 SYCE1Q8N0S2 351 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 REXO1Q8N1G1 1221 aaKnown RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 ADAM33Q9BZ11 813 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 ARMCX3Q9UH62 379 aaPredicted RBP11.86□□□□□ -0.51
SNX20-201ENST00000300590 KIAA1024Q9UPX6 916 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 C2CD2Q9Y426 696 aa11.86□□□□□ -0.51
SNX20-201ENST00000300590 A6NHS1 94 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 VPS41P49754 854 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 RPS6KA3P51812 740 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 PTENP60484 403 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 POU5F1Q01860 360 aaKnown RBP11.85□□□□□ -0.51
SNX20-201ENST00000300590 CAVIN4Q5BKX8 364 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 INTS8Q75QN2 995 aaKnown RBP11.85□□□□□ -0.51
SNX20-201ENST00000300590 ALG3Q92685 438 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.85□□□□□ -0.51
SNX20-201ENST00000300590 SEC63Q9UGP8 760 aaKnown RBP11.85□□□□□ -0.51
SNX20-201ENST00000300590 FER1L4A9Z1Z3 1794 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 ANKRD63C9JTQ0 380 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 CES2O00748 559 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 NUDT17P0C025 328 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 GNA11P29992 359 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 GNAQP50148 359 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 TRIP13Q15645 432 aaPredicted RBP11.85□□□□□ -0.51
SNX20-201ENST00000300590 RASGEF1CQ8N431 466 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 TXLNGYQ9BZA5 131 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 STK17AQ9UEE5 414 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 RASAL2Q9UJF2 1139 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 IGSF9BQ9UPX0 1349 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 ENTPD5O75356 428 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 BRAFP15056 766 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 PON1P27169 355 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 MARCKSL1P49006 195 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 PPP1R15BQ5SWA1 713 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 GPBP1Q86WP2 473 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 COL23A1Q86Y22 540 aaPredicted RBP11.85□□□□□ -0.51
SNX20-201ENST00000300590 PROM2Q8N271 834 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 TTC8Q8TAM2 541 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 SPIRE2Q8WWL2 714 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 CTNNBL1Q8WYA6 563 aaPredicted RBP11.85□□□□□ -0.51
SNX20-201ENST00000300590 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 TMEM47Q9BQJ4 181 aa11.85□□□□□ -0.51
SNX20-201ENST00000300590 ABCB11O95342 1321 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 RIPK2O43353 540 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 KLRK1P26718 216 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 MAPK7Q13164 816 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 GRM4Q14833 912 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 SEPT2Q15019 361 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 ARHGAP44Q17R89 818 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 MUM1Q2TAK8 710 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 GALNTL6Q49A17 601 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 CCDC152Q4G0S7 254 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 ZCWPW2Q504Y3 356 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 SRRM1Q8IYB3 904 aaKnown RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 SUPT20HQ8NEM7 779 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 SCFD1Q8WVM8 642 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 ITFG2Q969R8 447 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 UTP4Q969X6 686 aaKnown RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 DNAJC19Q96DA6 116 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 ARHGEF26Q96DR7 871 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 MRRFQ96E11 262 aaKnown RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 HES6Q96HZ4 224 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 STXBP5LQ9Y2K9 1186 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 XRCC5P13010 732 aaKnown RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 CASP5P51878 434 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 MGAT5Q09328 741 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 MPP2Q14168 576 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 UBE2SQ16763 222 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 GBP7Q8N8V2 638 aaPredicted RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 KRT35Q92764 455 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 RAB34Q9BZG1 259 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 IKZF4Q9H2S9 585 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 RXFP1Q9HBX9 757 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 METTL5Q9NRN9 209 aaKnown RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 GCNT4Q9P109 453 aa11.84□□□□□ -0.51
SNX20-201ENST00000300590 FRMPD2Q68DX3 1309 aaPredicted RBP11.84□□□□□ -0.51
SNX20-201ENST00000300590 PYGLP06737 847 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 FESP07332 822 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 ZBTB48P10074 688 aaPredicted RBP11.83□□□□□ -0.52
SNX20-201ENST00000300590 FERP16591 822 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CASP4P49662 377 aa11.83□□□□□ -0.52
SNX20-201ENST00000300590 CCDC6Q16204 474 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms