RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 FAM81BQ96LP2 452 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 PTPREP23469 700 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 MDH1P40925 334 aaKnown RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 SERPINB4P48594 390 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 PRAMEP78395 509 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 TAGAPQ8N103 731 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 PAGR1Q9BTK6 254 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 HACD3Q9P035 362 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 ANAPC7Q9UJX3 599 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 ENO1P06733 434 aaKnown RBP15.84■□□□□ 0.13
SCN3B-201ENST00000299333 LRRC24Q50LG9 513 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 SZRD1Q7Z422 152 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 ZBED2Q9BTP6 218 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 GDAQ9Y2T3 454 aa15.84■□□□□ 0.13
SCN3B-201ENST00000299333 LRRC53A6NM62 1247 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 ATP2B4P23634 1241 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 PSMA2P25787 234 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 SIX5Q8N196 739 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 SNX19Q92543 992 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 ZNF577Q9BSK1 485 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 SLC52A2Q9HAB3 445 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 ALG13Q9NP73 1137 aaKnown RBP15.83■□□□□ 0.13
SCN3B-201ENST00000299333 C6orf203Q9P0P8 240 aaPredicted RBP15.83■□□□□ 0.13
SCN3B-201ENST00000299333 M0R2C6 588 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 CCDC22O60826 627 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 UBTFL6P0CB48 400 aaPredicted RBP15.83■□□□□ 0.13
SCN3B-201ENST00000299333 SLC9A5Q14940 896 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 OLFML1Q6UWY5 402 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 SH2D3CQ8N5H7 860 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 SLC17A8Q8NDX2 589 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 GRAMD1AQ96CP6 724 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 TMEM206Q9H813 350 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 NRBP2Q9NSY0 501 aa15.83■□□□□ 0.13
SCN3B-201ENST00000299333 TRAPPC8Q9Y2L5 1435 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 ZNF189O75820 626 aaPredicted RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 ZNF18P17022 549 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 ALDH18A1P54886 795 aaKnown RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 CAV1Q03135 178 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 CATSPER1Q8NEC5 780 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 EDC4Q6P2E9 1401 aaKnown RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 PJA2O43164 708 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 ADCY3O60266 1144 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 EIF4A1P60842 406 aaKnown RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 SCARA5Q6ZMJ2 495 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 CCT8L2Q96SF2 557 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 EDEM3Q9BZQ6 932 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 NEUROG2Q9H2A3 272 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 TLR7Q9NYK1 1049 aaKnown RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 STAP2Q9UGK3 403 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 NOC2LQ9Y3T9 749 aaKnown RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 TMEM247A6NEH6 219 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 MIF4GDA9UHW6 222 aaKnown RBP15.83■□□□□ 0.12
SCN3B-201ENST00000299333 TBCCQ15814 346 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 AGR3Q8TD06 166 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 MRGBPQ9NV56 204 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 ARL2BPQ9Y2Y0 163 aa15.83■□□□□ 0.12
SCN3B-201ENST00000299333 TRIM49BA6NDI0 452 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 ZSCAN9O15535 394 aaPredicted RBP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 CTSWP56202 376 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 LRRC63Q05C16 580 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 BTKQ06187 659 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 MFSD14BQ5SR56 506 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 SYNDIG1LA6NDD5 238 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 IL10P22301 178 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 HSPA9P38646 679 aaKnown RBP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 FAM47CQ5HY64 1035 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 PLD3Q8IV08 490 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 PKD2L2Q9NZM6 624 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 PLXNC1O60486 1568 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 EIF3HO15372 352 aaKnown RBP eCLIP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 ATP1A1P05023 1023 aaKnown RBP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 IFNA8P32881 189 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 RFWD2Q8NHY2 731 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 DNAJC9Q8WXX5 260 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 GOLGA8IPA6NC78 632 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 GOLGA8JA6NMD2 632 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 FOSP01100 380 aaPredicted RBP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 GTF2IP78347 998 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 NANOGNBQ7Z5D8 188 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 ZBED8Q8IZ13 594 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 DLGAP2Q9P1A6 1054 aa15.82■□□□□ 0.12
SCN3B-201ENST00000299333 CPSF3Q9UKF6 684 aaKnown RBP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.82■□□□□ 0.12
SCN3B-201ENST00000299333 PHF20L1A8MW92 1017 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 MECOMQ03112 1051 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 TJAP1Q5JTD0 557 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ZMYM1Q5SVZ6 1142 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 TBC1D22AQ8WUA7 517 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 OSBPL5Q9H0X9 879 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ZNF408Q9H9D4 720 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 ADGRG1Q9Y653 693 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 PLA2G4BP0C869 781 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 MKRN3Q13064 507 aaKnown RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 PPP6R3Q5H9R7 873 aaPredicted RBP15.81■□□□□ 0.12
SCN3B-201ENST00000299333 FRA10AC1Q70Z53 315 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 CEP72Q9P209 647 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 GRID2IPA4D2P6 1211 aa15.81■□□□□ 0.12
SCN3B-201ENST00000299333 SEMA3EO15041 775 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms