RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 GABBR1Q9UBS5 961 aa7.29□□□□□ -1.24
DEPDC4-201ENST00000299185 DDX20Q9UHI6 824 aaKnown RBP7.29□□□□□ -1.24
DEPDC4-201ENST00000299185 RCOR1Q9UKL0 485 aa7.29□□□□□ -1.24
DEPDC4-201ENST00000299185 FAM184BQ9ULE4 1060 aa7.29□□□□□ -1.24
DEPDC4-201ENST00000299185 GPSM3Q9Y4H4 160 aa7.29□□□□□ -1.24
DEPDC4-201ENST00000299185 NFASCO94856 1347 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 IGSF9BQ9UPX0 1349 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 A0A1B0GVL5 298 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 B4DLN1 442 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 E9PMD0 336 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 BACH1O14867 736 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 OIP5O43482 229 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 PRPF40AO75400 957 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 GNRH1P01148 92 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 SPATA31C1P0DKV0 1188 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 PFKFB1P16118 471 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 RHOQP17081 205 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 PLCG1P19174 1290 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 TCF7P36402 384 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 CCT6AP40227 531 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 PRMT2P55345 433 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 RAB15P59190 212 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 PRKCEQ02156 737 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 PPP2R5CQ13362 524 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 FSCN1Q16658 493 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 TMEM266Q2M3C6 531 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 METTL7BQ6UX53 244 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 CXCL17Q6UXB2 119 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 DTHD1Q6ZMT9 781 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 CABP7Q86V35 215 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 MSL3Q8N5Y2 521 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 TMEM87AQ8NBN3 555 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 STAMQ92783 540 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 ERCC4Q92889 916 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 FERMT2Q96AC1 680 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 DHX58Q96C10 678 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 ARMC5Q96C12 935 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 NAP1L4Q99733 375 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 EIF2AK1Q9BQI3 630 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 LXNQ9BS40 222 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 RNF208Q9H0X6 261 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 UPF3AQ9H1J1 476 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 POLD4Q9HCU8 107 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 HMX1Q9NP08 348 aaPredicted RBP7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 DISC1Q9NRI5 854 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 LMBRD1Q9NUN5 540 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 LRWD1Q9UFC0 647 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 TCEAL9Q9UHQ7 104 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 SAMM50Q9Y512 469 aa7.28□□□□□ -1.24
DEPDC4-201ENST00000299185 ARID2Q68CP9 1835 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 LOC102724159A0A0B4J2E5 919 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 NPHP3-ACAD11A0A0J9YXS1 232 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 WDR64B1ANS9 1081 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 NOP56O00567 594 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 TBX3O15119 743 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 CUTAO60888 179 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 LILRA1O75019 489 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 STAM2O75886 525 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 STBD1O95210 358 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 SSBP05455 408 aaKnown RBP eCLIP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 RARBP10826 455 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 MX2P20592 715 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ATP4AP20648 1035 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 PRPHP41219 470 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 NDUFA8P51970 172 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 NPEPPSP55786 919 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ZNF200P98182 395 aaPredicted RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ORC2Q13416 577 aaPredicted RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 NEDD9Q14511 834 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 DHX8Q14562 1220 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ARHGEF6Q15052 776 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 PLCB4Q15147 1175 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 PWP2Q15269 919 aaKnown RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 LRRC41Q15345 812 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 DBN1Q16643 649 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 TMEM119Q4V9L6 283 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 RESP18Q5W5W9 173 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 IQSEC1Q6DN90 963 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 SWSAP1Q6NVH7 229 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ABHD15Q6UXT9 468 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 RIPOR1Q6ZS17 1223 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 TEX2Q8IWB9 1127 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 TPH2Q8IWU9 490 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 SLFN12Q8IYM2 578 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 IGSF22Q8N9C0 903 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 RASSF8Q8NHQ8 419 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 GPT2Q8TD30 523 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 KCNG4Q8TDN1 519 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 PIGOQ8TEQ8 1089 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 KAT2BQ92831 832 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 CDHR1Q96JP9 859 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 ZNF668Q96K58 619 aaPredicted RBP7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 FAM20AQ96MK3 541 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 PPP1R16BQ96T49 567 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 RIT2Q99578 217 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 OCSTAMPQ9BR26 566 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 KRTAP9-2Q9BYQ4 174 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 MAF1Q9H063 256 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 AP5M1Q9H0R1 490 aa7.27□□□□□ -1.25
DEPDC4-201ENST00000299185 PAK6Q9NQU5 681 aaPredicted RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms