RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 NT5C3AQ9H0P0 336 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 PLCB1Q9NQ66 1216 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 SSU72P8A0A1W2PR75 194 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 BUB1BO60566 1050 aaPredicted RBP16.94■□□□□ 0.3
UBAP1-201ENST00000297661 C9orf131Q5VYM1 1079 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 HIBCHQ6NVY1 386 aaPredicted RBP16.94■□□□□ 0.3
UBAP1-201ENST00000297661 DHX37Q8IY37 1157 aaKnown RBP16.94■□□□□ 0.3
UBAP1-201ENST00000297661 ARMC2Q8NEN0 867 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 ZNF483Q8TF39 744 aaPredicted RBP16.94■□□□□ 0.3
UBAP1-201ENST00000297661 CCT6BQ92526 530 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 RAPGEF5Q92565 580 aa16.94■□□□□ 0.3
UBAP1-201ENST00000297661 BCCIPQ9P287 314 aaKnown RBP eCLIP16.94■□□□□ 0.3
UBAP1-201ENST00000297661 MEIS2O14770 477 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 SLC12A3P55017 1021 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 ODF2Q5BJF6 829 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 GKAP1Q5VSY0 366 aaPredicted RBP16.93■□□□□ 0.3
UBAP1-201ENST00000297661 TCERG1LQ5VWI1 586 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 TAX1BP1Q86VP1 789 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 NSMCE1Q8WV22 266 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 TATDN2Q93075 761 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 STAMBPL1Q96FJ0 436 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 REEP2Q9BRK0 252 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 DHX36Q9H2U1 1008 aaKnown RBP16.93■□□□□ 0.3
UBAP1-201ENST00000297661 KCNMB3Q9NPA1 279 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 RNF14Q9UBS8 474 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 SWAP70Q9UH65 585 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 LRRC37AA6NMS7 1700 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 FER1L6Q2WGJ9 1857 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 ARFGEF1Q9Y6D6 1849 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 KDM3AQ9Y4C1 1321 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 FAM86B1E9PN63 330 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 FAM86B2P0C5J1 330 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 HSD17B3P37058 310 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 INHBEP58166 350 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 ARHGAP4P98171 946 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 MYO1EQ12965 1108 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 PPP1R7Q15435 360 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 GJB7Q6PEY0 223 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 LRIG3Q6UXM1 1119 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 SPICE1Q8N0Z3 855 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 ZNF526Q8TF50 670 aaPredicted RBP16.93■□□□□ 0.3
UBAP1-201ENST00000297661 TEKT1Q969V4 418 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 SPDL1Q96EA4 605 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 THOC1Q96FV9 657 aaKnown RBP16.93■□□□□ 0.3
UBAP1-201ENST00000297661 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
UBAP1-201ENST00000297661 YDJCA8MPS7 323 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 PHF20L1A8MW92 1017 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 CLIC2O15247 247 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 HOXD13P35453 343 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 PTK2Q05397 1052 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 HLTFQ14527 1009 aaKnown RBP eCLIP16.92■□□□□ 0.3
UBAP1-201ENST00000297661 ASIC2Q16515 512 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 SLC18A3Q16572 532 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 KLHL7Q8IXQ5 586 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 P3H4Q92791 437 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
UBAP1-201ENST00000297661 TSKSQ9UJT2 592 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 ECE2O60344 883 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 CRKP46108 304 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 CASP4P49662 377 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 MAP2K1Q02750 393 aaPredicted RBP16.92■□□□□ 0.3
UBAP1-201ENST00000297661 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
UBAP1-201ENST00000297661 ARMC9Q7Z3E5 817 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 CPLX4Q7Z7G2 160 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 CEP63Q96MT8 703 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 GANQ9H2C0 597 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 KDM4CQ9H3R0 1056 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 RGL1Q9NZL6 768 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 AJAP1Q9UKB5 411 aaPredicted RBP16.92■□□□□ 0.3
UBAP1-201ENST00000297661 MYH4Q9Y623 1939 aa16.92■□□□□ 0.3
UBAP1-201ENST00000297661 H0YGN5 161 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 CETN3O15182 167 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 RAD51CO43502 376 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 GHRP10912 638 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 PPP2R2AP63151 447 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 ZNF844Q08AG5 666 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 GIT2Q14161 759 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 NAB2Q15742 525 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 CERKLQ49MI3 558 aaPredicted RBP16.91■□□□□ 0.3
UBAP1-201ENST00000297661 HYIQ5T013 277 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 PSMD1Q99460 953 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 EBF2Q9HAK2 575 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 NFS1Q9Y697 457 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 GRID2IPA4D2P6 1211 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 RBAK-RBAKDNI3L0D1 243 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 SPATA31C1P0DKV0 1188 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 CTNNA1P35221 906 aaKnown RBP16.91■□□□□ 0.3
UBAP1-201ENST00000297661 UAP1Q16222 522 aaPredicted RBP16.91■□□□□ 0.3
UBAP1-201ENST00000297661 CC2D2BQ6DHV5 1058 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 ZNF571Q7Z3V5 609 aaPredicted RBP16.91■□□□□ 0.3
UBAP1-201ENST00000297661 SIAH1Q8IUQ4 282 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 KSR1Q8IVT5 923 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 LMBR1Q8WVP7 490 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 SPAG5Q96R06 1193 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 BHMT2Q9H2M3 363 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 TAF1DQ9H5J8 278 aaPredicted RBP16.91■□□□□ 0.3
UBAP1-201ENST00000297661 KIF9Q9HAQ2 790 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 BATF3Q9NR55 127 aa16.91■□□□□ 0.3
UBAP1-201ENST00000297661 ZBTB12Q9Y330 459 aaPredicted RBP16.91■□□□□ 0.3
UBAP1-201ENST00000297661 EME2A4GXA9 379 aaPredicted RBP16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms