RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 MFSD14CQ5VZR4 134 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 ZNF746Q6NUN9 644 aaPredicted RBP14.45□□□□□ -0.1
HPS3-201ENST00000296051 UNC13DQ70J99 1090 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 MDM1Q8TC05 714 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 STK17AQ9UEE5 414 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 ATF2P15336 505 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 TRAPPC11Q7Z392 1133 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 CFAP61Q8NHU2 1237 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 SPDL1Q96EA4 605 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 BHMT2Q9H2M3 363 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 NXF1Q9UBU9 619 aaKnown RBP14.45□□□□□ -0.1
HPS3-201ENST00000296051 CD163L1Q9NR16 1453 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 LRRD1A4D1F6 860 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 GCFC2P16383 781 aaKnown RBP14.45□□□□□ -0.1
HPS3-201ENST00000296051 CYP2B6P20813 491 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 PSMD6Q15008 389 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 CCDC14Q49A88 953 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 SGO2Q562F6 1265 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 LRRC8CQ8TDW0 803 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 GBP5Q96PP8 586 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 TRIM51Q9BSJ1 452 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 PHF20Q9BVI0 1012 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 TTI1O43156 1089 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 ELF1P32519 619 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 ALX1Q15699 326 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 SREK1Q8WXA9 508 aaKnown RBP14.45□□□□□ -0.1
HPS3-201ENST00000296051 ZNF653Q96CK0 615 aa14.45□□□□□ -0.1
HPS3-201ENST00000296051 ARHGAP42A6NI28 874 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 RAD51CO43502 376 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 PSAPP07602 524 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 ACTN1P12814 892 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 LMNB1P20700 586 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 KLRC1P26715 233 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 MTMR2Q13614 643 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 PPP2R5EQ16537 467 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 EARS2Q5JPH6 523 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 NSUN6Q8TEA1 469 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 CELF4Q9BZC1 486 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 SUFUQ9UMX1 484 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 COPB2P35606 906 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 RASSF2P50749 326 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 SF3B3Q15393 1217 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 PIGOQ8TEQ8 1089 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 DEFB129Q9H1M3 183 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 NOC2LQ9Y3T9 749 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 CEP170BQ9Y4F5 1589 aaPredicted RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 GLYCTKQ8IVS8 523 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 SRRM1Q8IYB3 904 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 CNOT10Q9H9A5 744 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 UBE2TQ9NPD8 197 aaPredicted RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 ITIH6Q6UXX5 1313 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 POTEB3A0JP26 581 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 POTECB2RU33 542 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 TROVE2P10155 538 aaKnown RBP eCLIP14.44□□□□□ -0.1
HPS3-201ENST00000296051 AKR1B1P15121 316 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 CTTNQ14247 550 aaKnown RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 CLUL1Q15846 466 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 POTEBQ6S5H4 581 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 ZNF34Q8IZ26 560 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 RAB3IPQ96QF0 476 aaPredicted RBP14.44□□□□□ -0.1
HPS3-201ENST00000296051 CEP72Q9P209 647 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 DAGLAQ9Y4D2 1042 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 USH1CQ9Y6N9 552 aa14.44□□□□□ -0.1
HPS3-201ENST00000296051 RCN2Q14257 317 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 WDR93Q6P2C0 686 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 THNSL1Q8IYQ7 743 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 DDX23Q9BUQ8 820 aaKnown RBP14.43□□□□□ -0.1
HPS3-201ENST00000296051 RPAP3Q9H6T3 665 aaPredicted RBP14.43□□□□□ -0.1
HPS3-201ENST00000296051 KIDINS220Q9ULH0 1771 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 K7ERI5 159 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 PPP2R5CQ13362 524 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 CHMP6Q96FZ7 201 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 RUNDC3BQ96NL0 473 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 HERC5Q9UII4 1024 aaKnown RBP14.43□□□□□ -0.1
HPS3-201ENST00000296051 ADGRB2O60241 1585 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 MTMR1Q13613 665 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 RCSD1Q6JBY9 416 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 RSBN1LQ6PCB5 846 aaPredicted RBP14.43□□□□□ -0.1
HPS3-201ENST00000296051 MMP19Q99542 508 aa14.43□□□□□ -0.1
HPS3-201ENST00000296051 NOP53Q9NZM5 478 aaKnown RBP14.43□□□□□ -0.1
HPS3-201ENST00000296051 A0A087X0B3 334 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.42□□□□□ -0.1
HPS3-201ENST00000296051 HERVK_113P62684 666 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 NTRK3Q16288 839 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 TWF2Q6IBS0 349 aaKnown RBP14.42□□□□□ -0.1
HPS3-201ENST00000296051 PDXDC1Q6P996 788 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 C4orf50Q6ZRC1 276 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 AGXT2Q9BYV1 514 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 SPDYE16A6NNV3 312 aaPredicted RBP14.42□□□□□ -0.1
HPS3-201ENST00000296051 ENO4A6NNW6 628 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 CCDC188H7C350 402 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 MYL7Q01449 175 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 SPDYE2Q495Y8 402 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 CFAP157Q5JU67 520 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 SDCCAG8Q86SQ7 713 aaPredicted RBP14.42□□□□□ -0.1
HPS3-201ENST00000296051 HEMGNQ9BXL5 484 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 FEM1BQ9UK73 627 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 ZBTB5O15062 677 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 OPHN1O60890 802 aa14.42□□□□□ -0.1
HPS3-201ENST00000296051 ECEL1O95672 775 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms