RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 LRRC27Q9C0I9 530 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 FAM49AQ9H0Q0 323 aaPredicted RBP16.78■□□□□ 0.28
CCDC140-201ENST00000295226 POLR3FQ9H1D9 316 aaPredicted RBP16.78■□□□□ 0.28
CCDC140-201ENST00000295226 TRMT13Q9NUP7 481 aaKnown RBP16.78■□□□□ 0.28
CCDC140-201ENST00000295226 IGKV6-21A0A0C4DH24 114 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 FAM13AO94988 1023 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 HOXC8P31273 242 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 SARSP49591 514 aaKnown RBP16.78■□□□□ 0.28
CCDC140-201ENST00000295226 ASAP3Q8TDY4 903 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 TRPV6Q9H1D0 765 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 KCND2Q9NZV8 630 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 MAN1B1Q9UKM7 699 aa16.78■□□□□ 0.28
CCDC140-201ENST00000295226 MYH11P35749 1972 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 A0A0U1RQG5 324 aaPredicted RBP16.77■□□□□ 0.28
CCDC140-201ENST00000295226 SYCE3A1L190 88 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 MBLAC1A4D2B0 266 aaPredicted RBP16.77■□□□□ 0.28
CCDC140-201ENST00000295226 MAGEB2O15479 319 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 TBCAO75347 108 aaKnown RBP16.77■□□□□ 0.28
CCDC140-201ENST00000295226 SMC2O95347 1197 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 VTNP04004 478 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 CYP2C9P11712 490 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 TMEM62Q0P6H9 643 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 COASYQ13057 564 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 HERC4Q5GLZ8 1057 aaPredicted RBP16.77■□□□□ 0.28
CCDC140-201ENST00000295226 CNNM4Q6P4Q7 775 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 UNC13DQ70J99 1090 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 SFR1Q86XK3 245 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 KIAA0319LQ8IZA0 1049 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 MYCT1Q8N699 235 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 GLIS3Q8NEA6 775 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 MCPH1Q8NEM0 835 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 SPATA20Q8TB22 786 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 PRPF31Q8WWY3 499 aaKnown RBP16.77■□□□□ 0.28
CCDC140-201ENST00000295226 WNT8BQ93098 351 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 CTAGE1Q96RT6 745 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 FGFBP2Q9BYJ0 223 aa16.77■□□□□ 0.28
CCDC140-201ENST00000295226 SUCLA2Q9P2R7 463 aaPredicted RBP16.77■□□□□ 0.28
CCDC140-201ENST00000295226 ARVCFO00192 962 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 ARL2P36404 184 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 PEX3P56589 373 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 PTGISQ16647 500 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 RBM43Q6ZSC3 357 aaKnown RBP16.76■□□□□ 0.27
CCDC140-201ENST00000295226 SESTD1Q86VW0 696 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 CCDC65Q8IXS2 484 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 SMYD4Q8IYR2 804 aaPredicted RBP16.76■□□□□ 0.27
CCDC140-201ENST00000295226 LINC01465Q8N7H1 131 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 SLC43A3Q8NBI5 491 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 RETREG2Q8NC44 543 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 DNAJB3Q8WWF6 145 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 PPP1R9BQ96SB3 815 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 KIFC3Q9BVG8 833 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 PPME1Q9Y570 386 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 PCDHA2Q9Y5H9 948 aa16.76■□□□□ 0.27
CCDC140-201ENST00000295226 FRMD3A2A2Y4 597 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 B4GALT4O60513 344 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 MYL1P05976 194 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 GNAT1P11488 350 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 COL6A1P12109 1028 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 BMP6P22004 513 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 GLRA2P23416 452 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 CDK7P50613 346 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 IER5Q5VY09 327 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 SLC39A5Q6ZMH5 540 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 RHPN2Q8IUC4 686 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 TSPY26PQ9H489 355 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 PARVGQ9HBI0 331 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 SLC39A2Q9NP94 309 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 EXOC1Q9NV70 894 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 ODF2LQ9ULJ1 636 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 AKT3Q9Y243 479 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 GDAQ9Y2T3 454 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 PVALEFA0A1B0GWK0 134 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 SRGAP2CP0DJJ0 459 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 NMT1P30419 496 aaKnown RBP16.75■□□□□ 0.27
CCDC140-201ENST00000295226 ZNF131P52739 623 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 LAMTOR4Q0VGL1 99 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 STK4Q13043 487 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 ODR4Q5SWX8 454 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 NT5DC1Q5TFE4 455 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 KIFAP3Q92845 792 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 DRC1Q96MC2 740 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 GSDMAQ96QA5 445 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 JPH2Q9BR39 696 aaPredicted RBP16.75■□□□□ 0.27
CCDC140-201ENST00000295226 MAPK8IP1Q9UQF2 711 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 COL4A3BPQ9Y5P4 624 aa16.75■□□□□ 0.27
CCDC140-201ENST00000295226 CCDC169A6NNP5 214 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 PQBP1O60828 265 aaKnown RBP16.74■□□□□ 0.27
CCDC140-201ENST00000295226 PLS3P13797 630 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 TMOD1P28289 359 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 DNM2P50570 870 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 CASP5P51878 434 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 EHHADHQ08426 723 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 ANKLE1Q8NAG6 615 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 PSPC1Q8WXF1 523 aaKnown RBP16.74■□□□□ 0.27
CCDC140-201ENST00000295226 TRIM44Q96DX7 344 aaPredicted RBP16.74■□□□□ 0.27
CCDC140-201ENST00000295226 TIPINQ9BVW5 301 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 C11orf49Q9H6J7 331 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 CDHR5Q9HBB8 845 aa16.74■□□□□ 0.27
CCDC140-201ENST00000295226 SMIM35A0A1B0GVV1 85 aa16.73■□□□□ 0.27
CCDC140-201ENST00000295226 SLC16A4O15374 487 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms