RNA–Protein interactions for RNA: ENST00000295057.3

LRRTM1-201, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRTM1, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-201ENST00000295057 ILDR2Q71H61 639 aa16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 RAPGEF5Q92565 580 aa16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 CALML4Q96GE6 196 aa16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 DEFB129Q9H1M3 183 aa16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 TAF1DQ9H5J8 278 aaPredicted RBP16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 PCDHA12Q9UN75 941 aa16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 BRCA1P38398 1863 aaKnown RBP16.65■□□□□ 0.26
LRRTM1-201ENST00000295057 ARFGEF1Q9Y6D6 1849 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 PPP1R12BO60237 982 aaPredicted RBP16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 CTNNA1P35221 906 aaKnown RBP16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 SARNPP82979 210 aaKnown RBP16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 ODF2Q5BJF6 829 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 DLK2Q6UY11 383 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 CACNA2D4Q7Z3S7 1137 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 RNF10Q8N5U6 811 aaKnown RBP16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 PACSIN1Q9BY11 444 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 RNF14Q9UBS8 474 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 TSKSQ9UJT2 592 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 MYMKA6NI61 221 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 FZD9O00144 591 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 TLR2O60603 784 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 RTN2O75298 545 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 ARFGAP2Q8N6H7 521 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 GOLPH3Q9H4A6 298 aa16.64■□□□□ 0.25
LRRTM1-201ENST00000295057 SPDYE3A6NKU9 549 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 SRRM3A6NNA2 597 aaPredicted RBP16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 ENOX2Q16206 610 aaKnown RBP16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 MEI1Q5TIA1 1274 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 USP38Q8NB14 1042 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 CRYGNQ8WXF5 182 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 NOVA2Q9UNW9 492 aaKnown RBP16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 ASNSP08243 561 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 MYBP10242 640 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 EZRP15311 586 aaKnown RBP16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 MAP3K10Q02779 954 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 ORC2Q13416 577 aaPredicted RBP16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 MAN2A1Q16706 1144 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 ACCSLQ4AC99 568 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 KRT79Q5XKE5 535 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 CENPPQ6IPU0 288 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 CCDC50Q8IVM0 306 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 TRPM4Q8TD43 1214 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 TBC1D31Q96DN5 1066 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 AGBL1Q96MI9 1066 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 ISCUQ9H1K1 167 aa16.63■□□□□ 0.25
LRRTM1-201ENST00000295057 ARID5AQ03989 594 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 KCNMA1Q12791 1236 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 TLDC1Q6P9B6 456 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 CACNA2D3Q8IZS8 1091 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 LENG9Q96B70 501 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 CLSTN1O94985 981 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 PDIA5Q14554 519 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 NAB2Q15742 525 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 LRIG3Q6UXM1 1119 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 GLIS3Q8NEA6 775 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 UBLCP1Q8WVY7 318 aaPredicted RBP16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 LARP4BQ92615 738 aaKnown RBP16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 CCDC47Q96A33 483 aaKnown RBP16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 HVCN1Q96D96 273 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 IQCDQ96DY2 449 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 C7orf25Q9BPX7 421 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 AP1M1Q9BXS5 423 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 TANGO6Q9C0B7 1094 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 KCNMB3Q9NPA1 279 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 FBXL5Q9UKA1 691 aa16.62■□□□□ 0.25
LRRTM1-201ENST00000295057 POTEB3A0JP26 581 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 GRID2IPA4D2P6 1211 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 POTECB2RU33 542 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 E9PMD0 336 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 USP11P51784 963 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 PPP2R2AP63151 447 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 ANGEL2Q5VTE6 544 aaKnown RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 POTEBQ6S5H4 581 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 ARHGAP27Q6ZUM4 889 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 SV2BQ7L1I2 683 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 DNAAF5Q86Y56 855 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 MDM1Q8TC05 714 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 MAGEC3Q8TD91 643 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 TATDN2Q93075 761 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 KIAA1024Q9UPX6 916 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 SSU72P8A0A1W2PR75 194 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 RBAK-RBAKDNI3L0D1 243 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 KCNK3O14649 394 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 SKAP2O75563 359 aaPredicted RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 RPS12P25398 132 aaKnown RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 MAGOHP61326 146 aaKnown RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 TNNC1P63316 161 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 CACNB1Q02641 598 aaPredicted RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 AP3B2Q13367 1082 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 XRCC4Q13426 336 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 ZKSCAN8Q15776 578 aaPredicted RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 CCT6BQ92526 530 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 RAD54LQ92698 747 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 MAGOHBQ96A72 148 aaKnown RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 RANBP17Q9H2T7 1088 aaKnown RBP16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 SPON1Q9HCB6 807 aa16.61■□□□□ 0.25
LRRTM1-201ENST00000295057 NPHP3-ACAD11A0A0J9YXS1 232 aa16.6■□□□□ 0.25
LRRTM1-201ENST00000295057 C5orf60A6NFR6 353 aa16.6■□□□□ 0.25
LRRTM1-201ENST00000295057 KIAA0753Q2KHM9 967 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms