RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 AFAP1L1Q8TED9 768 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 ATP6V0A1Q93050 837 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 CEP89Q96ST8 783 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 DMAC2Q9NW81 257 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
PDPN-201ENST00000294489 CCL15-CCL14A0A0B4J2E2 113 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 EIF3CLB5ME19 914 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 FARP2O94887 1054 aaPredicted RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 NR3C1P04150 777 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 PLS3P13797 630 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 NCKAP1LP55160 1127 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 RTP1P59025 263 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 MYBPC2Q14324 1141 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 SPA17Q15506 151 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 CCL15Q16663 113 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 ZNF792Q3KQV3 632 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 MIS18BP1Q6P0N0 1132 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 ZNF467Q7Z7K2 595 aaPredicted RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 GPRC5AQ8NFJ5 357 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 BORCS6Q96GS4 357 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 EIF3CQ99613 913 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 PDCL3Q9H2J4 239 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 DEF6Q9H4E7 631 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 ZCCHC17Q9NP64 241 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 CEP72Q9P209 647 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 A0A0U1RQJ8 604 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 CTAGE9A4FU28 777 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 KRT86O43790 486 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 CELF2O95319 508 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 CYP2C8P10632 490 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 XRCC5P13010 732 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 UBA1P22314 1058 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 NMT1P30419 496 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 KCNMA1Q12791 1236 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 KCNH2Q12809 1159 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 TUBB2AQ13885 445 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 SLC9A9Q8IVB4 645 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 CCDC60Q8IWA6 550 aaPredicted RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 PDCL2Q8N4E4 241 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 EHBP1Q8NDI1 1231 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 SLC17A8Q8NDX2 589 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 ATRIPQ8WXE1 791 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 MPHOSPH6Q99547 160 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 PTPN18Q99952 460 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 NTPCRQ9BSD7 190 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 TUBB2BQ9BVA1 445 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 NIFKQ9BYG3 293 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 LARSQ9P2J5 1176 aaKnown RBP10.03□□□□□ -0.8
PDPN-201ENST00000294489 GABBR1Q9UBS5 961 aa10.03□□□□□ -0.8
PDPN-201ENST00000294489 GSTTP1A0A1W2PQM5 241 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 LRRC53A6NM62 1247 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 EPHB6O15197 1021 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 ATP4AP20648 1035 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 ARHGAP25P42331 645 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 GTF2BQ00403 316 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 NAA30Q147X3 362 aaPredicted RBP10.02□□□□□ -0.8
PDPN-201ENST00000294489 CCDC62Q6P9F0 684 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 ZNF662Q6ZS27 426 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 OTUD6AQ7L8S5 288 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 C12orf56Q8IXR9 622 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 CCDC155Q8N6L0 562 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 GOLGA5Q8TBA6 731 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 DRC1Q96MC2 740 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 LSM14BQ9BX40 385 aaKnown RBP10.02□□□□□ -0.8
PDPN-201ENST00000294489 PORCNQ9H237 461 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 C17orf75Q9HAS0 396 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 CGNQ9P2M7 1197 aaKnown RBP10.02□□□□□ -0.8
PDPN-201ENST00000294489 DDX41Q9UJV9 622 aaKnown RBP10.02□□□□□ -0.8
PDPN-201ENST00000294489 GUCA1BQ9UMX6 200 aa10.02□□□□□ -0.8
PDPN-201ENST00000294489 REXO2Q9Y3B8 237 aaKnown RBP10.02□□□□□ -0.8
PDPN-201ENST00000294489 ZSWIM8A7E2V4 1837 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 RBM47A0AV96 593 aaKnown RBP10.02□□□□□ -0.81
PDPN-201ENST00000294489 AFPP02771 609 aaKnown RBP10.02□□□□□ -0.81
PDPN-201ENST00000294489 SNRPFP62306 86 aaKnown RBP10.02□□□□□ -0.81
PDPN-201ENST00000294489 CCNA1P78396 465 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 NEDD9Q14511 834 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 KCTD2Q14681 263 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 CCDC122Q5T0U0 273 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 CHADLQ6NUI6 762 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 UBXN4Q92575 508 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 PCYT2Q99447 389 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 ZNF408Q9H9D4 720 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.02□□□□□ -0.81
PDPN-201ENST00000294489 PPME1Q9Y570 386 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 MRFAP1Q9Y605 127 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 V9GYY5 206 aaPredicted RBP10.02□□□□□ -0.81
PDPN-201ENST00000294489 CLIC2O15247 247 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 STRNO43815 780 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 LGR5O75473 907 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 AKAP3O75969 853 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 KCNA1Q09470 495 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 ZC2HC1CQ53FD0 456 aaPredicted RBP10.02□□□□□ -0.81
PDPN-201ENST00000294489 XKR3Q5GH77 459 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 SWSAP1Q6NVH7 229 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 PDXDC1Q6P996 788 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 SLC35F6Q8N357 371 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 SPIRE2Q8WWL2 714 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 BAP1Q92560 729 aa10.02□□□□□ -0.81
PDPN-201ENST00000294489 SYN2Q92777 582 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms