RNA–Protein interactions for RNA: ENST00000291458.9

CCDC58-201, Transcript of coiled-coil domain containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC58, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-201ENST00000291458 PADI3Q9ULW8 664 aa10.99□□□□□ -0.65
CCDC58-201ENST00000291458 NOC2LQ9Y3T9 749 aaKnown RBP10.99□□□□□ -0.65
CCDC58-201ENST00000291458 TTC3P53804 2025 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 CYP3A7-CYP3A51PA0A087WV96 503 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 DENND3A2RUS2 1198 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 DDX11L8A8MPP1 907 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 RPS6KA5O75582 802 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 GCFC2P16383 781 aaKnown RBP10.98□□□□□ -0.65
CCDC58-201ENST00000291458 FGFR4P22455 802 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 CYP3A7P24462 503 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 CTNNB1P35222 781 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 DRP2Q13474 957 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 CALCRLQ16602 461 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 FAM177A1Q8N128 213 aaPredicted RBP10.98□□□□□ -0.65
CCDC58-201ENST00000291458 FAM184AQ8NB25 1140 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 TNFRSF25Q93038 417 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 TOP1MTQ969P6 601 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 MBOAT7Q96N66 472 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 UPF2Q9HAU5 1272 aaKnown RBP10.98□□□□□ -0.65
CCDC58-201ENST00000291458 NPDC1Q9NQX5 325 aaPredicted RBP10.98□□□□□ -0.65
CCDC58-201ENST00000291458 NRBP2Q9NSY0 501 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 VAV3Q9UKW4 847 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 CEP131Q9UPN4 1083 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 INSL6Q9Y581 213 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 MTCH2Q9Y6C9 303 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 COL4A6Q14031 1691 aa10.98□□□□□ -0.65
CCDC58-201ENST00000291458 DLL1O00548 723 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 ENPP3O14638 875 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 MGEA5O60502 916 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 NEMFO60524 1076 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 CSDE1O75534 798 aaKnown RBP10.97□□□□□ -0.65
CCDC58-201ENST00000291458 RPLP2P05387 115 aaKnown RBP10.97□□□□□ -0.65
CCDC58-201ENST00000291458 MCM7P33993 719 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 NLRP11P59045 1033 aaKnown RBP10.97□□□□□ -0.65
CCDC58-201ENST00000291458 PTGDRQ13258 359 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 CTTNQ14247 550 aaKnown RBP10.97□□□□□ -0.65
CCDC58-201ENST00000291458 SAFBQ15424 915 aaKnown RBP eCLIP10.97□□□□□ -0.65
CCDC58-201ENST00000291458 FAM228AQ86W67 206 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 GPIHBP1Q8IV16 184 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 FIBCD1Q8N539 461 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 NLRP7Q8WX94 980 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 HAS1Q92839 578 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 DYDC2Q96IM9 177 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 LXNQ9BS40 222 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 TMX1Q9H3N1 280 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 ERVK-5Q9HDB9 667 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 KCNMB3Q9NPA1 279 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 THEGQ9P2T0 379 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 ADGRA3Q8IWK6 1321 aa10.97□□□□□ -0.65
CCDC58-201ENST00000291458 TCF20Q9UGU0 1960 aaKnown RBP10.97□□□□□ -0.65
CCDC58-201ENST00000291458 FNDC1Q4ZHG4 1894 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 MAGEB2O15479 319 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 LPXNO60711 386 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 CD2BP2O95400 341 aaKnown RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 BAG4O95429 457 aaKnown RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 TMOD1P28289 359 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 NPEPPSP55786 919 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 ERVK-21P61565 698 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 PSMC5P62195 406 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 HTRA4P83105 476 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 TFF2Q03403 129 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 PPP2R5CQ13362 524 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 BTG3Q14201 252 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 RABEP1Q15276 862 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 EPC2Q52LR7 807 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 XKR3Q5GH77 459 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 PPP4R3AQ6IN85 833 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 RTN4RL1Q86UN2 441 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 NME8Q8N427 588 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 RNF169Q8NCN4 708 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 RDM1Q8NG50 284 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 ZSCAN31Q96LW9 406 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 NLRP4Q96MN2 994 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 NAP1L4Q99733 375 aaKnown RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 ADAM2Q99965 735 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 SH2B1Q9NRF2 756 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 RGL1Q9NZL6 768 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 WRAP73Q9P2S5 460 aaPredicted RBP10.96□□□□□ -0.65
CCDC58-201ENST00000291458 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 VPS9D1Q9Y2B5 631 aa10.96□□□□□ -0.65
CCDC58-201ENST00000291458 KDM3AQ9Y4C1 1321 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 A0A087WWV3 80 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 GPR32O75388 356 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 TXKP42681 527 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 RBM25P49756 843 aaKnown RBP10.95□□□□□ -0.66
CCDC58-201ENST00000291458 POLGP54098 1239 aaPredicted RBP10.95□□□□□ -0.66
CCDC58-201ENST00000291458 GPM6BQ13491 265 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 ZNF174Q15697 407 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 SPOUT1Q5T280 376 aaKnown RBP10.95□□□□□ -0.66
CCDC58-201ENST00000291458 ADGRD1Q6QNK2 874 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 B3GNT9Q6UX72 402 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 EP400NLQ6ZTU2 488 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 ANO5Q75V66 913 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 RHPN2Q8IUC4 686 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 TPH2Q8IWU9 490 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 TMEM192Q8IY95 271 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 CEP170P1Q96L14 293 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 FAM20AQ96MK3 541 aa10.95□□□□□ -0.66
CCDC58-201ENST00000291458 CCDC43Q96MW1 224 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms