RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 POTEGQ6S5H5 508 aa28.04■■■□□ 2.08
PDF-201ENST00000288022 FAM228AQ86W67 206 aa28.04■■■□□ 2.08
PDF-201ENST00000288022 NLRP4Q96MN2 994 aa28.04■■■□□ 2.08
PDF-201ENST00000288022 MTRQ99707 1265 aa28.04■■■□□ 2.08
PDF-201ENST00000288022 TMX1Q9H3N1 280 aa28.04■■■□□ 2.08
PDF-201ENST00000288022 INSL6Q9Y581 213 aa28.04■■■□□ 2.08
PDF-201ENST00000288022 LCHNA4D1U4 455 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 EIF4BP23588 611 aaKnown RBP28.03■■■□□ 2.08
PDF-201ENST00000288022 IGSF22Q8N9C0 903 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 TCP11Q8WWU5 503 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 PSPC1Q8WXF1 523 aaKnown RBP28.03■■■□□ 2.08
PDF-201ENST00000288022 LINC01599Q8WXQ3 324 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 MYLIPQ8WY64 445 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 NACC1Q96RE7 527 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 YME1L1Q96TA2 773 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 GCOM2Q9BZD3 368 aaPredicted RBP28.03■■■□□ 2.08
PDF-201ENST00000288022 STK24Q9Y6E0 443 aa28.03■■■□□ 2.08
PDF-201ENST00000288022 A0A087WZ62 844 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 DENND3A2RUS2 1198 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 GAS2O43903 313 aaKnown RBP28.02■■■□□ 2.08
PDF-201ENST00000288022 XRCC6P12956 609 aaKnown RBP eCLIP28.02■■■□□ 2.08
PDF-201ENST00000288022 DARSP14868 501 aaKnown RBP28.02■■■□□ 2.08
PDF-201ENST00000288022 IBSPP21815 317 aaPredicted RBP28.02■■■□□ 2.08
PDF-201ENST00000288022 RARRES1P49788 294 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 IL17AQ16552 155 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 RTN4RL1Q86UN2 441 aaPredicted RBP28.02■■■□□ 2.08
PDF-201ENST00000288022 KSR1Q8IVT5 923 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 SNX29Q8TEQ0 813 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 FDXACB1Q9BRP7 624 aaPredicted RBP28.02■■■□□ 2.08
PDF-201ENST00000288022 TSPYL2Q9H2G4 693 aaPredicted RBP28.02■■■□□ 2.08
PDF-201ENST00000288022 ATP6V0A4Q9HBG4 840 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 COL4A3BPQ9Y5P4 624 aa28.02■■■□□ 2.08
PDF-201ENST00000288022 DGAT1O75907 488 aa28.01■■■□□ 2.07
PDF-201ENST00000288022 ZNF410Q86VK4 478 aa28.01■■■□□ 2.07
PDF-201ENST00000288022 PRPF31Q8WWY3 499 aaKnown RBP28.01■■■□□ 2.07
PDF-201ENST00000288022 ADAM2Q99965 735 aa28.01■■■□□ 2.07
PDF-201ENST00000288022 PRDM12Q9H4Q4 367 aa28.01■■■□□ 2.07
PDF-201ENST00000288022 CERS4Q9HA82 394 aa28.01■■■□□ 2.07
PDF-201ENST00000288022 PP2D1A8MPX8 630 aa28■■■□□ 2.07
PDF-201ENST00000288022 STX6O43752 255 aa28■■■□□ 2.07
PDF-201ENST00000288022 USO1O60763 962 aaKnown RBP28■■■□□ 2.07
PDF-201ENST00000288022 ARHGEF15O94989 841 aa28■■■□□ 2.07
PDF-201ENST00000288022 HTRA4P83105 476 aaPredicted RBP28■■■□□ 2.07
PDF-201ENST00000288022 TAP1Q03518 808 aa28■■■□□ 2.07
PDF-201ENST00000288022 KRT79Q5XKE5 535 aa28■■■□□ 2.07
PDF-201ENST00000288022 FAM43BQ6ZT52 329 aaPredicted RBP28■■■□□ 2.07
PDF-201ENST00000288022 DBR1Q9UK59 544 aaKnown RBP28■■■□□ 2.07
PDF-201ENST00000288022 MTMR6Q9Y217 621 aa28■■■□□ 2.07
PDF-201ENST00000288022 STXBP5LQ9Y2K9 1186 aa28■■■□□ 2.07
PDF-201ENST00000288022 VWA3AA6NCI4 1184 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 MGEA5O60502 916 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 CSDE1O75534 798 aaKnown RBP27.99■■■□□ 2.07
PDF-201ENST00000288022 MUTP22033 750 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 FGFR4P22455 802 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 RESTQ13127 1097 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 INO80BQ9C086 356 aaPredicted RBP27.99■■■□□ 2.07
PDF-201ENST00000288022 XPNPEP1Q9NQW7 623 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 LRFN2Q9ULH4 789 aa27.99■■■□□ 2.07
PDF-201ENST00000288022 ARHGEF35A5YM69 484 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 BMP15O95972 392 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 SRGAP2CP0DJJ0 459 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 FOSL2P15408 326 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 CDC25AP30304 524 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 LAMTOR4Q0VGL1 99 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 ARL6IP4Q66PJ3 421 aaKnown RBP27.98■■■□□ 2.07
PDF-201ENST00000288022 SPRYD3Q8NCJ5 442 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 GAS2L1Q99501 681 aaPredicted RBP27.98■■■□□ 2.07
PDF-201ENST00000288022 C1orf112Q9NSG2 853 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 KIAA1024Q9UPX6 916 aa27.98■■■□□ 2.07
PDF-201ENST00000288022 LINC01553A4QN01 128 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 ASAP2O43150 1006 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 STAG3L1P0CL83 205 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 ZSCAN20P17040 1043 aaPredicted RBP27.97■■■□□ 2.07
PDF-201ENST00000288022 SFPQP23246 707 aaKnown RBP eCLIP27.97■■■□□ 2.07
PDF-201ENST00000288022 SF3A1Q15459 793 aaKnown RBP27.97■■■□□ 2.07
PDF-201ENST00000288022 ECM1Q16610 540 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 NPAS4Q8IUM7 802 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 ARNTL2Q8WYA1 636 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 RGS18Q9NS28 235 aa27.97■■■□□ 2.07
PDF-201ENST00000288022 DDX19AQ9NUU7 478 aaKnown RBP27.97■■■□□ 2.07
PDF-201ENST00000288022 SARSP49591 514 aaKnown RBP27.96■■■□□ 2.07
PDF-201ENST00000288022 ZRSR1Q15695 479 aaKnown RBP27.96■■■□□ 2.07
PDF-201ENST00000288022 SLC24A5Q71RS6 500 aa27.96■■■□□ 2.07
PDF-201ENST00000288022 MAEAQ7L5Y9 396 aa27.96■■■□□ 2.07
PDF-201ENST00000288022 MTUS1Q9ULD2 1270 aa27.96■■■□□ 2.07
PDF-201ENST00000288022 DSC3Q14574 896 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 MXD4Q14582 209 aaPredicted RBP27.95■■■□□ 2.06
PDF-201ENST00000288022 FAM173BQ6P4H8 233 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 PADI6Q6TGC4 694 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 SPRED2Q7Z698 418 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 RNF149Q8NC42 400 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 SP7Q8TDD2 431 aaPredicted RBP27.95■■■□□ 2.06
PDF-201ENST00000288022 POLR3FQ9H1D9 316 aaPredicted RBP27.95■■■□□ 2.06
PDF-201ENST00000288022 ZSCAN16Q9H4T2 348 aaPredicted RBP27.95■■■□□ 2.06
PDF-201ENST00000288022 IFT122Q9HBG6 1241 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 PCDHB7Q9Y5E2 793 aa27.95■■■□□ 2.06
PDF-201ENST00000288022 TFDP1Q14186 410 aa27.94■■■□□ 2.06
PDF-201ENST00000288022 CATSPER4Q7RTX7 472 aa27.94■■■□□ 2.06
PDF-201ENST00000288022 MCPH1Q8NEM0 835 aa27.94■■■□□ 2.06
PDF-201ENST00000288022 TGS1Q96RS0 853 aaKnown RBP27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms